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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100839767   pentatricopeptide repeat-containing protein At5g41170, mitochondrial 
 hvu-r.1   123397750   pentatricopeptide repeat-containing protein At5g41170, mitochondrial 
 osa-u.5   107275716   pentatricopeptide repeat-containing protein At5g41170, mitochondrial 
 zma-u.5   103650263   pentatricopeptide repeat-containing protein At5g16640, mitochondrial 
 sbi-r.1   8084413   pentatricopeptide repeat-containing protein At5g41170, mitochondrial 
 ath-u.5   AT1G30290   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100802835   pentatricopeptide repeat-containing protein At1g09900 
 gma-u.5   100791479   pentatricopeptide repeat-containing protein At1g09900 
 sly-u.5   101268891   pentatricopeptide repeat-containing protein At1g09900 
 bra-r.6   103840412   pentatricopeptide repeat-containing protein At5g41170, mitochondrial 
 vvi-u.5   100244620   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 ppo-u.5   7497054   pentatricopeptide repeat-containing protein At1g09900 
 mtr-u.5   11445619   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 ghi-r.1   107913809   pentatricopeptide repeat-containing protein At1g09900 
 ghi-r.1   107937511   pentatricopeptide repeat-containing protein At1g09900 
 bna-r.1   106367284   pentatricopeptide repeat-containing protein At5g41170, mitochondrial 
 bna-r.1   106411529   pentatricopeptide repeat-containing protein At5g39710 
 sot-r.1   102588334   pentatricopeptide repeat-containing protein At1g09900 
 cit-r.1   112495474   pentatricopeptide repeat-containing protein At5g16640, mitochondrial 
 nta-r.1   107776135   uncharacterized LOC107776135 
 nta-r.1   107781845   uncharacterized LOC107781845 

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Top 50 coexpressed genes to 100839767 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100839767 (bdi-r.1 coexpression data)

CoexMap"100839767"


bdiLOC100839767 | Entrez gene ID : 100839767      
Species bdi hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre tae
Paralog 1 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003579133.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 1,  extr 1,  vacu 1,  nucl 1,  cyto 1,  plas 1,  cyto_nucl 1,  cyto_mito 1,  nucl_plas 1,  E.R._vacu 1,  cyto_plas 1  (predict for XP_003579133.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_003579133.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100839767
hvu-r.1
for
123397750
osa-u.5
for
107275716
zma-u.5
for
103650263
sbi-r.1
for
8084413
ath-u.5
for
AT1G30290
gma-u.5
for
100802835
gma-u.5
for
100791479
sly-u.5
for
101268891
bra-r.6
for
103840412
vvi-u.5
for
100244620
ppo-u.5
for
7497054
mtr-u.5
for
11445619
ghi-r.1
for
107913809
ghi-r.1
for
107937511
bna-r.1
for
106367284
bna-r.1
for
106411529
sot-r.1
for
102588334
cit-r.1
for
112495474
nta-r.1
for
107776135
nta-r.1
for
107781845


Ortholog ID: 9818
Species bdi hvu osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC100839767 LOC123397750 LOC107275716 LOC103650263 LOC8084413 AT1G30290 LOC100802835 LOC100791479 LOC101268891 LOC103840412 LOC100244620 LOC7497054 LOC11445619 LOC107913809 LOC107937511 LOC106367284 LOC106411529 LOC102588334 LOC112495474 LOC107776135 LOC107781845
Function* pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At5g16640, mitochondrial pentatricopeptide repeat-containing protein At5g41170, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At5g16640, mitochondrial uncharacterized LOC107776135 uncharacterized LOC107781845
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03040 Spliceosome 3
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03040 Spliceosome 3
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot04016 MAPK signaling pathway - plant 4
sot04070 Phosphatidylinositol signaling system 4
sot04075 Plant hormone signal transduction 4
sot04626 Plant-pathogen interaction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100839767 123397750 107275716 103650263 8084413 839909 100802835 100791479 101268891 103840412 100244620 7497054 11445619 107913809 107937511 106367284 106411529 102588334 112495474 107776135 107781845
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