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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   112495474   pentatricopeptide repeat-containing protein At5g16640, mitochondrial 
 ath-u.5   AT1G30290   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100802835   pentatricopeptide repeat-containing protein At1g09900 
 gma-u.5   100791479   pentatricopeptide repeat-containing protein At1g09900 
 vvi-u.5   100244620   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 ppo-u.5   7497054   pentatricopeptide repeat-containing protein At1g09900 
 mtr-u.5   11445619   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 sly-u.5   101268891   pentatricopeptide repeat-containing protein At1g09900 
 osa-u.5   107275716   pentatricopeptide repeat-containing protein At5g41170, mitochondrial 
 zma-u.5   103650263   pentatricopeptide repeat-containing protein At5g16640, mitochondrial 

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Top 50 coexpressed genes to 112495474 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 112495474 (cit-r.1 coexpression data)

CoexMap"112495474"


citLOC112495474 | Entrez gene ID : 112495474    
Species cit ath gma vvi ppo mtr sly osa zma bdi hvu bra bna sbi ghi sot nta cre tae
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_024950894.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  cyto 1,  plas 1,  E.R. 1,  cyto_mito 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_024950894.2)
Subcellular
localization
TargetP
scret 5  (predict for XP_024950894.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
112495474
ath-u.5
for
AT1G30290
gma-u.5
for
100802835
gma-u.5
for
100791479
vvi-u.5
for
100244620
ppo-u.5
for
7497054
mtr-u.5
for
11445619
sly-u.5
for
101268891
osa-u.5
for
107275716
zma-u.5
for
103650263


Ortholog ID: 9818
Species cit ath bra ghi ghi bna bna gma gma vvi ppo mtr sly sot nta nta osa zma hvu sbi bdi
Symbol LOC112495474 AT1G30290 LOC103840412 LOC107913809 LOC107937511 LOC106411529 LOC106367284 LOC100802835 LOC100791479 LOC100244620 LOC7497054 LOC11445619 LOC101268891 LOC102588334 LOC107776135 LOC107781845 LOC107275716 LOC103650263 LOC123397750 LOC8084413 LOC100839767
Function* pentatricopeptide repeat-containing protein At5g16640, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 uncharacterized LOC107776135 uncharacterized LOC107781845 pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At5g16640, mitochondrial pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At5g41170, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03040 Spliceosome 3
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03040 Spliceosome 3
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot04016 MAPK signaling pathway - plant 4
sot04070 Phosphatidylinositol signaling system 4
sot04075 Plant hormone signal transduction 4
sot04626 Plant-pathogen interaction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 112495474 839909 103840412 107913809 107937511 106411529 106367284 100802835 100791479 100244620 7497054 11445619 101268891 102588334 107776135 107781845 107275716 103650263 123397750 8084413 100839767
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