Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100841964   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 tae-r.2   123096831   pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like 
 hvu-r.1   123448308   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 osa-u.5   4351121   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 zma-u.5   103637747   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 sbi-r.1   8055119   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ath-u.5   AT1G16480   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100806492   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 sly-u.5   101264459   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 bra-r.6   103835997   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 vvi-u.5   100256124   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 vvi-u.5   100854377   pentatricopeptide repeat-containing protein At4g33170 
 mtr-u.5   11438958   pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 ghi-r.1   107895129   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ghi-r.1   107919883   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 bna-r.1   106387584   putative pentatricopeptide repeat-containing protein At5g52630 
 bna-r.1   106402965   pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like 
 sot-r.1   102588182   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 cit-r.1   102623732   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 nta-r.1   107779411   pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like 
 nta-r.1   107783273   pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like 
 nta-r.1   107769960   pentatricopeptide repeat-containing protein At4g13650-like 

close


Top 50 coexpressed genes to 100841964 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100841964 (bdi-r.1 coexpression data)

CoexMap"100841964"


bdiLOC100841964 | Entrez gene ID : 100841964      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi mtr ghi bna sot cit nta cre ppo
Paralog 1 1 1 1 1 1 1 1 1 1 2 1 2 2 1 1 3 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (707 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_010235181.1 [sequence] [blastp]
XP_010235182.1 [sequence] [blastp]
XP_024317621.1 [sequence] [blastp]
XP_024317622.1 [sequence] [blastp]
XP_024317623.1 [sequence] [blastp]
XP_024317624.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  chlo 1  (predict for XP_010235181.1)
cyto 4,  nucl 4,  chlo 1  (predict for XP_010235182.1)
cyto 4,  nucl 4,  chlo 1  (predict for XP_024317621.1)
cyto 4,  nucl 4,  chlo 1  (predict for XP_024317622.1)
cyto 4,  nucl 4,  chlo 1  (predict for XP_024317623.1)
cyto 4,  nucl 4,  chlo 1  (predict for XP_024317624.1)
Subcellular
localization
TargetP
other 6  (predict for XP_010235181.1)
other 6  (predict for XP_010235182.1)
other 6  (predict for XP_024317621.1)
other 6  (predict for XP_024317622.1)
other 6  (predict for XP_024317623.1)
other 6  (predict for XP_024317624.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100841964
tae-r.2
for
123096831
hvu-r.1
for
123448308
osa-u.5
for
4351121
zma-u.5
for
103637747
sbi-r.1
for
8055119
ath-u.5
for
AT1G16480
gma-u.5
for
100806492
sly-u.5
for
101264459
bra-r.6
for
103835997
vvi-u.5
for
100256124
vvi-u.5
for
100854377
mtr-u.5
for
11438958
ghi-r.1
for
107895129
ghi-r.1
for
107919883
bna-r.1
for
106387584
bna-r.1
for
106402965
sot-r.1
for
102588182
cit-r.1
for
102623732
nta-r.1
for
107779411
nta-r.1
for
107783273
nta-r.1
for
107769960


Ortholog ID: 10458
Species bdi tae hvu osa zma sbi ath gma sly bra vvi vvi mtr ghi ghi bna bna sot cit nta nta nta
Symbol LOC100841964 LOC123096831 LOC123448308 LOC4351121 LOC103637747 LOC8055119 AT1G16480 LOC100806492 LOC101264459 LOC103835997 LOC100256124 LOC100854377 LOC11438958 LOC107895129 LOC107919883 LOC106387584 LOC106402965 LOC102588182 LOC102623732 LOC107779411 LOC107783273 LOC107769960
Function* pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g33170 pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like pentatricopeptide repeat-containing protein At4g13650-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100841964 123096831 123448308 4351121 103637747 8055119 838218 100806492 101264459 103835997 100256124 100854377 11438958 107895129 107919883 106387584 106402965 102588182 102623732 107779411 107783273 107769960
The preparation time of this page was 0.3 [sec].