Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11438958   pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 mtr-r.5   11438958   pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 mtr-m.5   11438958   pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 gma-u.5   100806492   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ath-u.5   AT1G16480   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100256124   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 vvi-u.5   100854377   pentatricopeptide repeat-containing protein At4g33170 
 sly-u.5   101264459   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 osa-u.5   4351121   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 zma-u.5   103637747   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 

close


Top 50 coexpressed genes to 11438958 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 11438958 (mtr-u.5 coexpression data)

CoexMap"11438958"


mtrLOC11438958 | Entrez gene ID : 11438958      
Species mtr gma ath vvi sly osa zma bdi hvu bra cit bna ppo sbi ghi sot nta cre tae
Paralog 3 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (919 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003622422.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  cyto_plas 3,  E.R. 3,  cyto 1,  chlo 1,  vacu 1  (predict for XP_003622422.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003622422.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11438958
mtr-r.5
for
11438958
mtr-m.5
for
11438958
gma-u.5
for
100806492
ath-u.5
for
AT1G16480
vvi-u.5
for
100256124
vvi-u.5
for
100854377
sly-u.5
for
101264459
osa-u.5
for
4351121
zma-u.5
for
103637747


Ortholog ID: 10458
Species mtr gma ath bra vvi vvi ghi ghi bna bna cit sly sot nta nta osa zma tae hvu sbi bdi
Symbol LOC11438958 LOC100806492 AT1G16480 LOC103835997 LOC100854377 LOC100256124 LOC107919883 LOC107895129 LOC106387584 LOC106402965 LOC102623732 LOC101264459 LOC102588182 LOC107779411 LOC107769960 LOC4351121 LOC103637747 LOC123096831 LOC123448308 LOC8055119 LOC100841964
Function* pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At3g24000, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At4g33170 pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like pentatricopeptide repeat-containing protein At4g13650-like pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11438958 100806492 838218 103835997 100854377 100256124 107919883 107895129 106387584 106402965 102623732 101264459 102588182 107779411 107769960 4351121 103637747 123096831 123448308 8055119 100841964
The preparation time of this page was 0.1 [sec].