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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100846280   pentatricopeptide repeat-containing protein At5g18475 
 tae-r.2   123167238   pentatricopeptide repeat-containing protein At5g18475 
 tae-r.2   123157713   pentatricopeptide repeat-containing protein At5g18475 
 tae-r.2   123153169   pentatricopeptide repeat-containing protein At5g18475 
 hvu-r.1   123410577   pentatricopeptide repeat-containing protein At5g18475-like 
 osa-u.5   4329334   pentatricopeptide repeat-containing protein At5g18475 
 sbi-r.1   8080040   pentatricopeptide repeat-containing protein At5g18475 
 ath-u.5   AT5G18475   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100790966   pentatricopeptide repeat-containing protein At5g18475 
 sly-u.5   101249352   pentatricopeptide repeat-containing protein At5g18475 
 bra-r.6   103851174   pentatricopeptide repeat-containing protein At5g18475 
 vvi-u.5   100243762   pentatricopeptide repeat-containing protein At5g18475 
 ppo-u.5   7461811   pentatricopeptide repeat-containing protein At5g18475 
 ghi-r.1   107953223   pentatricopeptide repeat-containing protein At5g18475 
 ghi-r.1   107954347   pentatricopeptide repeat-containing protein At5g18475 
 bna-r.1   106431478   pentatricopeptide repeat-containing protein At5g18475 
 bna-r.1   111202821   pentatricopeptide repeat-containing protein At5g18475-like 
 sot-r.1   102586522   pentatricopeptide repeat-containing protein At5g18475 
 cit-r.1   102629363   pentatricopeptide repeat-containing protein At5g18475 
 nta-r.1   107776748   uncharacterized LOC107776748 
 nta-r.1   107818344   uncharacterized LOC107818344 

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Top 50 coexpressed genes to 100846280 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100846280 (bdi-r.1 coexpression data)

CoexMap"100846280"


bdiLOC100846280 | Entrez gene ID : 100846280      
Species bdi tae hvu osa sbi ath gma sly bra vvi ppo ghi bna sot cit nta zma cre mtr
Paralog 1 3 1 1 1 1 1 1 1 1 1 2 2 1 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003564089.1 [sequence] [blastp]
XP_010227853.1 [sequence] [blastp]
XP_010227854.1 [sequence] [blastp]
XP_014752386.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003564089.1)
chlo 9  (predict for XP_010227853.1)
chlo 9  (predict for XP_010227854.1)
chlo 9  (predict for XP_014752386.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_003564089.1)
chlo 5  (predict for XP_010227853.1)
chlo 5  (predict for XP_010227854.1)
chlo 5  (predict for XP_014752386.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100846280
tae-r.2
for
123167238
tae-r.2
for
123157713
tae-r.2
for
123153169
hvu-r.1
for
123410577
osa-u.5
for
4329334
sbi-r.1
for
8080040
ath-u.5
for
AT5G18475
gma-u.5
for
100790966
sly-u.5
for
101249352
bra-r.6
for
103851174
vvi-u.5
for
100243762
ppo-u.5
for
7461811
ghi-r.1
for
107953223
ghi-r.1
for
107954347
bna-r.1
for
106431478
bna-r.1
for
111202821
sot-r.1
for
102586522
cit-r.1
for
102629363
nta-r.1
for
107776748
nta-r.1
for
107818344


Ortholog ID: 11821
Species bdi tae tae tae hvu osa sbi ath gma sly bra vvi ppo ghi ghi bna bna sot cit nta nta
Symbol LOC100846280 LOC123167238 LOC123157713 LOC123153169 LOC123410577 LOC4329334 LOC8080040 AT5G18475 LOC100790966 LOC101249352 LOC103851174 LOC100243762 LOC7461811 LOC107953223 LOC107954347 LOC106431478 LOC111202821 LOC102586522 LOC102629363 LOC107776748 LOC107818344
Function* pentatricopeptide repeat-containing protein At5g18475 pentatricopeptide repeat-containing protein At5g18475 pentatricopeptide repeat-containing protein At5g18475 pentatricopeptide repeat-containing protein At5g18475 pentatricopeptide repeat-containing protein At5g18475-like pentatricopeptide repeat-containing protein At5g18475 pentatricopeptide repeat-containing protein At5g18475 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g18475 pentatricopeptide repeat-containing protein At5g18475 pentatricopeptide repeat-containing protein At5g18475 pentatricopeptide repeat-containing protein At5g18475 pentatricopeptide repeat-containing protein At5g18475 pentatricopeptide repeat-containing protein At5g18475 pentatricopeptide repeat-containing protein At5g18475 pentatricopeptide repeat-containing protein At5g18475 pentatricopeptide repeat-containing protein At5g18475-like pentatricopeptide repeat-containing protein At5g18475 pentatricopeptide repeat-containing protein At5g18475 uncharacterized LOC107776748 uncharacterized LOC107818344
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03013 Nucleocytoplasmic transport 3
sly03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00340 Histidine metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00220 Arginine biosynthesis 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot03018 RNA degradation 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit00020 Citrate cycle (TCA cycle) 2
cit01200 Carbon metabolism 2
cit01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta03410 Base excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100846280 123167238 123157713 123153169 123410577 4329334 8080040 2745987 100790966 101249352 103851174 100243762 7461811 107953223 107954347 106431478 111202821 102586522 102629363 107776748 107818344
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