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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100853585   pentatricopeptide repeat-containing protein At4g17616 
 vvi-r.5   100853585   pentatricopeptide repeat-containing protein At4g17616 
 ath-u.5   AT4G17616   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100812849   pentatricopeptide repeat-containing protein At4g17616 
 ppo-u.5   18096902   pentatricopeptide repeat-containing protein At4g17616 
 mtr-u.5   25493580   pentatricopeptide repeat-containing protein At4g17616 
 sly-u.5   101259433   pentatricopeptide repeat-containing protein At4g17616 
 osa-u.5   4343289   pentatricopeptide repeat-containing protein At4g17616 
 zma-u.5   103642138   uncharacterized LOC103642138 

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Top 50 coexpressed genes to 100853585 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100853585 (vvi-u.5 coexpression data)

CoexMap"100853585"


vviLOC100853585 | Entrez gene ID : 100853585    
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010662700.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  nucl 2,  mito 2,  cyto_mito 1  (predict for XP_010662700.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_010662700.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100853585
vvi-r.5
for
100853585
ath-u.5
for
AT4G17616
gma-u.5
for
100812849
ppo-u.5
for
18096902
mtr-u.5
for
25493580
sly-u.5
for
101259433
osa-u.5
for
4343289
zma-u.5
for
103642138


Ortholog ID: 11156
Species vvi ath gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100853585 AT4G17616 LOC100812849 LOC103860924 LOC18096902 LOC25493580 LOC107926596 LOC107953537 LOC106440229 LOC111197910 LOC102630251 LOC101259433 LOC102602769 LOC107821637 LOC107793602 LOC4343289 LOC103642138 LOC123045909 LOC123189660 LOC123411833 LOC8068506 LOC100822802
Function* pentatricopeptide repeat-containing protein At4g17616 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 uncharacterized LOC103642138 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 3
ppo01200 Carbon metabolism 3
ppo01230 Biosynthesis of amino acids 2
ppo00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ppo00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100853585 6240541 100812849 103860924 18096902 25493580 107926596 107953537 106440229 111197910 102630251 101259433 102602769 107821637 107793602 4343289 103642138 123045909 123189660 123411833 8068506 100822802
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