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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101259433   pentatricopeptide repeat-containing protein At4g17616 
 sly-r.6   101259433   pentatricopeptide repeat-containing protein At4g17616 
 sot-r.1   102602769   pentatricopeptide repeat-containing protein At4g17616 
 nta-r.1   107793602   pentatricopeptide repeat-containing protein At4g17616 
 nta-r.1   107821637   pentatricopeptide repeat-containing protein At4g17616 
 ath-u.5   AT4G17616   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100812849   pentatricopeptide repeat-containing protein At4g17616 
 bra-r.6   103860924   pentatricopeptide repeat-containing protein At4g17616 
 vvi-u.5   100853585   pentatricopeptide repeat-containing protein At4g17616 
 ppo-u.5   18096902   pentatricopeptide repeat-containing protein At4g17616 
 mtr-u.5   25493580   pentatricopeptide repeat-containing protein At4g17616 
 ghi-r.1   107926596   pentatricopeptide repeat-containing protein At4g17616 
 ghi-r.1   107953537   pentatricopeptide repeat-containing protein At4g17616 
 bna-r.1   106440229   pentatricopeptide repeat-containing protein At4g17616 
 bna-r.1   111197910   pentatricopeptide repeat-containing protein At4g17616 
 cit-r.1   102630251   pentatricopeptide repeat-containing protein At4g17616 
 osa-u.5   4343289   pentatricopeptide repeat-containing protein At4g17616 
 zma-u.5   103642138   uncharacterized LOC103642138 
 tae-r.2   123189660   pentatricopeptide repeat-containing protein At4g17616 
 tae-r.2   123053776   pentatricopeptide repeat-containing protein At4g17616 
 tae-r.2   123045909   pentatricopeptide repeat-containing protein At4g17616 
 hvu-r.1   123411833   pentatricopeptide repeat-containing protein At4g17616 
 sbi-r.1   8068506   pentatricopeptide repeat-containing protein At4g17616 
 bdi-r.1   100822802   pentatricopeptide repeat-containing protein At4g17616 

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Top 50 coexpressed genes to 101259433 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101259433 (sly-u.5 coexpression data)

CoexMap"101259433"


slyLOC101259433 | Entrez gene ID : 101259433      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 1 1 1 1 1 2 2 1 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_025886576.1 [sequence] [blastp]
XP_025886578.1 [sequence] [blastp]
XP_025886579.1 [sequence] [blastp]
XP_069153406.1 [sequence] [blastp]
XP_069153407.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo_mito 4,  mito 4,  chlo 3,  cyto_mito 2,  nucl 2  (predict for XP_025886576.1)
chlo_mito 4,  mito 4,  chlo 3,  cyto_mito 2,  nucl 2  (predict for XP_025886578.1)
chlo_mito 4,  mito 4,  chlo 3,  cyto_mito 2,  nucl 2  (predict for XP_025886579.1)
chlo_mito 4,  mito 4,  chlo 3,  cyto_mito 2,  nucl 2  (predict for XP_069153406.1)
chlo_mito 4,  mito 4,  chlo 3,  cyto_mito 2,  nucl 2  (predict for XP_069153407.1)
Subcellular
localization
TargetP
mito 5,  scret 3  (predict for XP_025886576.1)
mito 5,  scret 3  (predict for XP_025886578.1)
mito 5,  scret 3  (predict for XP_025886579.1)
mito 5,  scret 3  (predict for XP_069153406.1)
mito 5,  scret 3  (predict for XP_069153407.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101259433
sly-r.6
for
101259433
sot-r.1
for
102602769
nta-r.1
for
107793602
nta-r.1
for
107821637
ath-u.5
for
AT4G17616
gma-u.5
for
100812849
bra-r.6
for
103860924
vvi-u.5
for
100853585
ppo-u.5
for
18096902
mtr-u.5
for
25493580
ghi-r.1
for
107926596
ghi-r.1
for
107953537
bna-r.1
for
106440229
bna-r.1
for
111197910
cit-r.1
for
102630251
osa-u.5
for
4343289
zma-u.5
for
103642138
tae-r.2
for
123189660
tae-r.2
for
123053776
tae-r.2
for
123045909
hvu-r.1
for
123411833
sbi-r.1
for
8068506
bdi-r.1
for
100822802


Ortholog ID: 11156
Species sly sot nta nta ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC101259433 LOC102602769 LOC107793602 LOC107821637 AT4G17616 LOC100812849 LOC103860924 LOC100853585 LOC18096902 LOC25493580 LOC107926596 LOC107953537 LOC106440229 LOC111197910 LOC102630251 LOC4343289 LOC103642138 LOC123189660 LOC123053776 LOC123045909 LOC123411833 LOC8068506 LOC100822802
Function* pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 uncharacterized LOC103642138 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616 pentatricopeptide repeat-containing protein At4g17616
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 3
ppo01200 Carbon metabolism 3
ppo01230 Biosynthesis of amino acids 2
ppo00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ppo00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101259433 102602769 107793602 107821637 6240541 100812849 103860924 100853585 18096902 25493580 107926596 107953537 106440229 111197910 102630251 4343289 103642138 123189660 123053776 123045909 123411833 8068506 100822802
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