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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100854516   small ribosomal subunit protein mS86 (rPPR1) 
 vvi-r.5   100854516   small ribosomal subunit protein mS86 (rPPR1) 
 ath-u.5   AT1G11630   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   PPR336   pentatricopeptide repeat 336 
 gma-u.5   102661867   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 gma-u.5   100793100   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 ppo-u.5   18111275   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 mtr-u.5   120576028   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 mtr-u.5   25486130   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 sly-u.5   101257607   small ribosomal subunit protein mS86 (rPPR1)-like 
 osa-u.5   4324129   small ribosomal subunit protein mS86 (rPPR1) 
 zma-u.5   100273462   Pentatricopeptide repeat-containing protein mitochondrial 

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Top 50 coexpressed genes to 100854516 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100854516 (vvi-u.5 coexpression data)

CoexMap"100854516"


vviLOC100854516 | Entrez gene ID : 100854516      
Species vvi ath gma ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_003634851.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  extr 1,  cyto 1,  vacu 1  (predict for XP_003634851.3)
Subcellular
localization
TargetP
scret 6  (predict for XP_003634851.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100854516

.
vvi-r.5
for
100854516

.
ath-u.5
for
AT1G11630

.
ath-u.5
for
PPR336

.
gma-u.5
for
102661867

.
gma-u.5
for
100793100

.
ppo-u.5
for
18111275

.
mtr-u.5
for
120576028

.
mtr-u.5
for
25486130

.
sly-u.5
for
101257607

.
osa-u.5
for
4324129

.
zma-u.5
for
100273462

.


Ortholog ID: 6398
Species ath ath gma gma sly osa zma bra bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit cit bdi nta nta
Symbol AT1G11630 PPR336 LOC100793100 LOC102661867 LOC101257607 LOC4324129 LOC100273462 LOC103831638 LOC103871915 LOC100854516 LOC18111275 LOC120576028 LOC25486130 LOC123062288 LOC123071049 LOC123444603 LOC107891814 LOC121203599 LOC106397214 LOC106376278 LOC8082382 LOC102597106 LOC102610828 LOC102611134 LOC100828573 LOC107805523 LOC107825292
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat 336 pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial small ribosomal subunit protein mS86 (rPPR1)-like small ribosomal subunit protein mS86 (rPPR1) Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g11630, mitochondrial small ribosomal subunit protein mS86 (rPPR1) pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g11630, mitochondrial-like pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g11630, mitochondrial-like pentatricopeptide repeat-containing protein At1g11630, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma00300 Lysine biosynthesis 2
zma00470 D-Amino acid metabolism 2
zma01230 Biosynthesis of amino acids 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 3
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi00240 Pyrimidine metabolism 3
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi01240 Biosynthesis of cofactors 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03013 Nucleocytoplasmic transport 2
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837707 842484 100793100 102661867 101257607 4324129 100273462 103831638 103871915 100854516 18111275 120576028 25486130 123062288 123071049 123444603 107891814 121203599 106397214 106376278 8082382 102597106 102610828 102611134 100828573 107805523 107825292
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