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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25486130   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 mtr-r.5   25486130   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 mtr-u.5   120576028   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 gma-u.5   102661867   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 gma-u.5   100793100   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 ppo-u.5   18111275   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 ath-u.5   AT1G11630   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   PPR336   pentatricopeptide repeat 336 
 vvi-u.5   100854516   small ribosomal subunit protein mS86 (rPPR1) 
 sly-u.5   101257607   small ribosomal subunit protein mS86 (rPPR1)-like 
 osa-u.5   4324129   small ribosomal subunit protein mS86 (rPPR1) 
 zma-u.5   100273462   Pentatricopeptide repeat-containing protein mitochondrial 

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Top 50 coexpressed genes to 25486130 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25486130 (mtr-u.5 coexpression data)

CoexMap"25486130"


mtrLOC25486130 | Entrez gene ID : 25486130      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_013462793.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  E.R. 2  (predict for XP_013462793.1)
Subcellular
localization
TargetP
mito 7,  chlo 4  (predict for XP_013462793.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25486130
mtr-r.5
for
25486130
mtr-u.5
for
120576028
gma-u.5
for
102661867
gma-u.5
for
100793100
ppo-u.5
for
18111275
ath-u.5
for
AT1G11630
ath-u.5
for
PPR336
vvi-u.5
for
100854516
sly-u.5
for
101257607
osa-u.5
for
4324129
zma-u.5
for
100273462


Ortholog ID: 6398
Species mtr mtr gma gma ppo ath ath bra bra vvi ghi ghi bna bna cit cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC120576028 LOC25486130 LOC100793100 LOC102661867 LOC18111275 AT1G11630 PPR336 LOC103831638 LOC103871915 LOC100854516 LOC107891814 LOC121203599 LOC106397214 LOC106376278 LOC102610828 LOC102611134 LOC101257607 LOC102597106 LOC107805523 LOC107825292 LOC4324129 LOC100273462 LOC123062288 LOC123071049 LOC123444603 LOC8082382 LOC100828573
Function* pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat 336 pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g11630, mitochondrial small ribosomal subunit protein mS86 (rPPR1) pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g11630, mitochondrial-like pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like small ribosomal subunit protein mS86 (rPPR1)-like pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g11630, mitochondrial-like pentatricopeptide repeat-containing protein At1g11630, mitochondrial small ribosomal subunit protein mS86 (rPPR1) Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 3
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03013 Nucleocytoplasmic transport 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma00300 Lysine biosynthesis 2
zma00470 D-Amino acid metabolism 2
zma01230 Biosynthesis of amino acids 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi00240 Pyrimidine metabolism 3
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi01240 Biosynthesis of cofactors 2
bdi01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 120576028 25486130 100793100 102661867 18111275 837707 842484 103831638 103871915 100854516 107891814 121203599 106397214 106376278 102610828 102611134 101257607 102597106 107805523 107825292 4324129 100273462 123062288 123071049 123444603 8082382 100828573
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