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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125580456   pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like 
 bna-r.1   106397214   pentatricopeptide repeat-containing protein At1g11630, mitochondrial-like 
 bna-r.1   106376278   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 bna-r.1   125610181   pentatricopeptide repeat-containing protein At1g11630, mitochondrial-like 
 bra-r.6   103831638   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 bra-r.6   103871915   pentatricopeptide repeat-containing protein At1g11630, mitochondrial 
 ath-u.5   AT1G11630   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   PPR336   pentatricopeptide repeat 336 
 ghi-r.1   121203599   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 ghi-r.1   107935401   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 ghi-r.1   107925226   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 cit-r.1   102610828   pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like 
 cit-r.1   102611134   pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like 
 gma-u.5   102661867   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 gma-u.5   100793100   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 vvi-u.5   100854516   small ribosomal subunit protein mS86 (rPPR1) 
 ppo-u.5   18111275   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 mtr-u.5   120576028   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 mtr-u.5   25486130   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 sly-u.5   101257607   small ribosomal subunit protein mS86 (rPPR1)-like 
 sot-r.1   102597106   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 nta-r.1   107805523   pentatricopeptide repeat-containing protein At1g11630, mitochondrial-like 
 nta-r.1   107825292   pentatricopeptide repeat-containing protein At1g11630, mitochondrial 
 osa-u.5   4324129   small ribosomal subunit protein mS86 (rPPR1) 
 zma-u.5   100273462   Pentatricopeptide repeat-containing protein mitochondrial 
 tae-r.2   123062288   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 tae-r.2   123071049   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 tae-r.2   123079421   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 hvu-r.1   123444603   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 sbi-r.1   8082382   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 bdi-r.1   100828573   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 

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Top 50 coexpressed genes to 125580456 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125580456 (bna-r.1 coexpression data)

CoexMap"125580456"


bnaLOC125580456 | Entrez gene ID : 125580456    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 2 2 1 1 2 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_048600870.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_048600870.1)
Subcellular
localization
TargetP
chlo 7,  mito 6  (predict for XP_048600870.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125580456
bna-r.1
for
106397214
bna-r.1
for
106376278
bna-r.1
for
125610181
bra-r.6
for
103831638
bra-r.6
for
103871915
ath-u.5
for
AT1G11630
ath-u.5
for
PPR336
ghi-r.1
for
121203599
ghi-r.1
for
107935401
ghi-r.1
for
107925226
cit-r.1
for
102610828
cit-r.1
for
102611134
gma-u.5
for
102661867
gma-u.5
for
100793100
vvi-u.5
for
100854516
ppo-u.5
for
18111275
mtr-u.5
for
120576028
mtr-u.5
for
25486130
sly-u.5
for
101257607
sot-r.1
for
102597106
nta-r.1
for
107805523
nta-r.1
for
107825292
osa-u.5
for
4324129
zma-u.5
for
100273462
tae-r.2
for
123062288
tae-r.2
for
123071049
tae-r.2
for
123079421
hvu-r.1
for
123444603
sbi-r.1
for
8082382
bdi-r.1
for
100828573


Ortholog ID: 6398
Species bna bna bna bra bra ath ath ghi ghi ghi cit cit gma gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC125580456 LOC106397214 LOC106376278 LOC103831638 LOC103871915 AT1G11630 PPR336 LOC121203599 LOC107935401 LOC107891814 LOC102610828 LOC102611134 LOC102661867 LOC100793100 LOC100854516 LOC18111275 LOC120576028 LOC25486130 LOC101257607 LOC102597106 LOC107805523 LOC107825292 LOC4324129 LOC100273462 LOC123062288 LOC123071049 LOC123079421 LOC123444603 LOC8082382 LOC100828573
Function* pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like pentatricopeptide repeat-containing protein At1g11630, mitochondrial-like pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g11630, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat 336 pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial small ribosomal subunit protein mS86 (rPPR1) pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial small ribosomal subunit protein mS86 (rPPR1)-like pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g11630, mitochondrial-like pentatricopeptide repeat-containing protein At1g11630, mitochondrial small ribosomal subunit protein mS86 (rPPR1) Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial pentatricopeptide repeat-containing protein At1g61870, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 3
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03013 Nucleocytoplasmic transport 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma00300 Lysine biosynthesis 2
zma00470 D-Amino acid metabolism 2
zma01230 Biosynthesis of amino acids 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi00240 Pyrimidine metabolism 3
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi01240 Biosynthesis of cofactors 2
bdi01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125580456 106397214 106376278 103831638 103871915 837707 842484 121203599 107935401 107891814 102610828 102611134 102661867 100793100 100854516 18111275 120576028 25486130 101257607 102597106 107805523 107825292 4324129 100273462 123062288 123071049 123079421 123444603 8082382 100828573
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