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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101245183   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 sly-r.6   101245183   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 ath-u.5   AT1G06560   NOL1/NOP2/sun family protein 
 gma-u.5   100813856   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 vvi-u.5   100253946   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 ppo-u.5   7464810   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 mtr-u.5   11429959   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 osa-u.5   4345386   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 zma-u.5   100279356   NOL1/NOP2/sun family protein 

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Top 50 coexpressed genes to 101245183 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101245183 (sly-u.5 coexpression data)

CoexMap"101245183"


slyLOC101245183 | Entrez gene ID : 101245183      
Species sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001510 [list] [network] RNA methylation  (52 genes)  IEA  
GO CC
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (54 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
Protein XP_004243608.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 3,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_004243608.2)
Subcellular
localization
TargetP
mito 6  (predict for XP_004243608.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101245183
sly-r.6
for
101245183
ath-u.5
for
AT1G06560
gma-u.5
for
100813856
vvi-u.5
for
100253946
ppo-u.5
for
7464810
mtr-u.5
for
11429959
osa-u.5
for
4345386
zma-u.5
for
100279356


Ortholog ID: 9760
Species sly sot nta nta ath gma bra bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu bdi cre
Symbol LOC101245183 LOC102583774 LOC107759550 LOC107774712 AT1G06560 LOC100813856 LOC103836472 LOC103844027 LOC100253946 LOC7464810 LOC11429959 LOC107924441 LOC107912676 LOC106362214 LOC125591414 LOC102618071 LOC4345386 LOC100279356 LOC123155977 LOC123148166 LOC123407033 LOC100826360 CHLRE_13g606200v5
Function* rRNA (cytosine-C(5))-methyltransferase NOP2C putative methyltransferase NSUN6 rRNA (cytosine-C(5))-methyltransferase NOP2C-like rRNA (cytosine-C(5))-methyltransferase NOP2C NOL1/NOP2/sun family protein rRNA (cytosine-C(5))-methyltransferase NOP2C tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C-like rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C NOL1/NOP2/sun family protein rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C putative methyltransferase NSUN6 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 4
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta04120 Ubiquitin mediated proteolysis 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03030 DNA replication 2
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
vvi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03440 Homologous recombination 3
ppo03030 DNA replication 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 8
cit03040 Spliceosome 3
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03440 Homologous recombination 3
hvu03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101245183 102583774 107759550 107774712 837167 100813856 103836472 103844027 100253946 7464810 11429959 107924441 107912676 106362214 125591414 102618071 4345386 100279356 123155977 123148166 123407033 100826360 5724691
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