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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106399730   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 bna-r.1   125591414   rRNA (cytosine-C(5))-methyltransferase NOP2C-like 
 bna-r.1   106427052   rRNA (cytosine-C(5))-methyltransferase NOP2C-like 
 bna-r.1   106362214   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 bra-r.6   103844027   tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 
 bra-r.6   103836472   tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 
 ath-u.5   AT1G06560   NOL1/NOP2/sun family protein 
 ghi-r.1   107924441   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 ghi-r.1   107912676   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 cit-r.1   102618071   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 gma-u.5   100813856   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 vvi-u.5   100253946   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 ppo-u.5   7464810   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 mtr-u.5   11429959   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 sly-u.5   101245183   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 sot-r.1   102583774   putative methyltransferase NSUN6 
 nta-r.1   107774712   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 nta-r.1   107759550   rRNA (cytosine-C(5))-methyltransferase NOP2C-like 
 osa-u.5   4345386   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 zma-u.5   100279356   NOL1/NOP2/sun family protein 
 tae-r.2   123163816   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 tae-r.2   123155977   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 tae-r.2   123148166   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 hvu-r.1   123407033   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 bdi-r.1   100826360   putative methyltransferase NSUN6 
 cre-r.1   CHLRE_13g606200v5   uncharacterized protein 

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Top 50 coexpressed genes to 106399730 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106399730 (bna-r.1 coexpression data)

CoexMap"106399730"


bnaLOC106399730 | Entrez gene ID : 106399730    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu bdi cre sbi
Paralog 4 2 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001510 [list] [network] RNA methylation  (170 genes)  IEA  
GO CC
GO MF
GO:0008168 [list] [network] methyltransferase activity  (844 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_013695637.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  cysk 1,  cyto_nucl 1,  nucl_plas 1  (predict for XP_013695637.2)
Subcellular
localization
TargetP
scret 8  (predict for XP_013695637.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106399730
bna-r.1
for
125591414
bna-r.1
for
106427052
bna-r.1
for
106362214
bra-r.6
for
103844027
bra-r.6
for
103836472
ath-u.5
for
AT1G06560
ghi-r.1
for
107924441
ghi-r.1
for
107912676
cit-r.1
for
102618071
gma-u.5
for
100813856
vvi-u.5
for
100253946
ppo-u.5
for
7464810
mtr-u.5
for
11429959
sly-u.5
for
101245183
sot-r.1
for
102583774
nta-r.1
for
107774712
nta-r.1
for
107759550
osa-u.5
for
4345386
zma-u.5
for
100279356
tae-r.2
for
123163816
tae-r.2
for
123155977
tae-r.2
for
123148166
hvu-r.1
for
123407033
bdi-r.1
for
100826360
cre-r.1
for
CHLRE_13g606200v5


Ortholog ID: 9760
Species bna bna bna bra bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu bdi cre
Symbol LOC125591414 LOC106427052 LOC106362214 LOC103844027 LOC103836472 AT1G06560 LOC107924441 LOC107912676 LOC102618071 LOC100813856 LOC100253946 LOC7464810 LOC11429959 LOC101245183 LOC102583774 LOC107774712 LOC107759550 LOC4345386 LOC100279356 LOC123163816 LOC123155977 LOC123148166 LOC123407033 LOC100826360 CHLRE_13g606200v5
Function* rRNA (cytosine-C(5))-methyltransferase NOP2C-like rRNA (cytosine-C(5))-methyltransferase NOP2C-like rRNA (cytosine-C(5))-methyltransferase NOP2C tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 NOL1/NOP2/sun family protein rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C putative methyltransferase NSUN6 rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C-like rRNA (cytosine-C(5))-methyltransferase NOP2C NOL1/NOP2/sun family protein rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C putative methyltransferase NSUN6 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 8
cit03040 Spliceosome 3
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03030 DNA replication 2
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
vvi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03440 Homologous recombination 3
ppo03030 DNA replication 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 4
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta04120 Ubiquitin mediated proteolysis 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 6
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03440 Homologous recombination 3
hvu03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125591414 106427052 106362214 103844027 103836472 837167 107924441 107912676 102618071 100813856 100253946 7464810 11429959 101245183 102583774 107774712 107759550 4345386 100279356 123163816 123155977 123148166 123407033 100826360 5724691
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