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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101246600   F-box/LRR-repeat protein At3g48880 
 sly-r.6   101246600   F-box/LRR-repeat protein At3g48880 
 sly-u.5   101247698   F-box/LRR-repeat protein At3g48880 
 sly-u.5   101247404   F-box/LRR-repeat protein At3g48880-like 
 sot-r.1   102604312   F-box/LRR-repeat protein At3g48880-like 
 sot-r.1   102597651   F-box/LRR-repeat protein At3g48880-like 
 sot-r.1   107062699   F-box/LRR-repeat protein At3g48880-like 
 nta-r.1   107770472   F-box/LRR-repeat protein At3g48880-like 
 nta-r.1   107823236   F-box/LRR-repeat protein At3g48880 
 ath-u.5   AT3G48880   RNI-like superfamily protein 
 gma-u.5   100791249   F-box/LRR-repeat protein At3g48880 
 gma-u.5   100789355   F-box/LRR-repeat protein At3g48880 
 bra-r.6   103873111   F-box/LRR-repeat protein At3g48880 
 bra-r.6   103874908   F-box/LRR-repeat protein At3g48880 
 vvi-u.5   100248117   F-box/LRR-repeat protein At3g48880-like 
 ppo-u.5   7454486   F-box/LRR-repeat protein At3g48880 
 ppo-u.5   7484395   F-box/LRR-repeat protein At3g48880 
 mtr-u.5   25485083   F-box/LRR-repeat protein At3g48880 
 mtr-u.5   25485084   F-box/LRR-repeat protein At3g48880 
 ghi-r.1   107936083   F-box/LRR-repeat protein At3g48880 
 ghi-r.1   107892071   F-box/LRR-repeat protein At3g48880 
 bna-r.1   106347454   F-box/LRR-repeat protein At3g48880-like 
 bna-r.1   106368666   F-box/LRR-repeat protein At3g48880 
 bna-r.1   106447520   F-box/LRR-repeat protein At3g48880 
 cit-r.1   102630101   F-box/LRR-repeat protein At3g48880 
 osa-u.5   4349047   F-box/LRR-repeat protein At3g48880 
 zma-u.5   100273810   uncharacterized LOC100273810 
 tae-r.2   123181206   F-box/LRR-repeat protein At3g48880 
 tae-r.2   123123262   F-box/LRR-repeat protein At3g48880 
 tae-r.2   123047787   F-box/LRR-repeat protein At3g48880 
 hvu-r.1   123433348   F-box/LRR-repeat protein At3g48880 
 sbi-r.1   8067083   F-box/LRR-repeat protein At3g48880 
 bdi-r.1   100828504   F-box/LRR-repeat protein At3g48880 

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Top 50 coexpressed genes to 101246600 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101246600 (sly-u.5 coexpression data)

CoexMap"101246600"


slyLOC101246600 | Entrez gene ID : 101246600    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 2 1 2 2 1 2 2 2 3 1 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004234380.1 [sequence] [blastp]
XP_010317588.1 [sequence] [blastp]
XP_010317590.1 [sequence] [blastp]
XP_069152338.1 [sequence] [blastp]
XP_069152339.1 [sequence] [blastp]
XP_069152340.1 [sequence] [blastp]
XP_069152342.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  nucl 2,  cysk_nucl 1,  cyto_plas 1,  chlo 1,  E.R. 1,  cyto_pero 1  (predict for XP_004234380.1)
cyto 3,  nucl 2,  cysk_nucl 1,  cyto_plas 1,  chlo 1,  E.R. 1,  cyto_pero 1  (predict for XP_010317588.1)
cyto 3,  nucl 2,  cysk_nucl 1,  cyto_plas 1,  chlo 1,  E.R. 1,  cyto_pero 1  (predict for XP_010317590.1)
cyto 3,  nucl 2,  cysk_nucl 1,  cyto_plas 1,  chlo 1,  E.R. 1,  cyto_pero 1  (predict for XP_069152338.1)
cyto 3,  nucl 2,  cysk_nucl 1,  cyto_plas 1,  chlo 1,  E.R. 1,  cyto_pero 1  (predict for XP_069152339.1)
cyto 3,  nucl 2,  cysk_nucl 1,  cyto_plas 1,  chlo 1,  E.R. 1,  cyto_pero 1  (predict for XP_069152340.1)
cyto 3,  nucl 2,  cysk_nucl 1,  cyto_plas 1,  chlo 1,  E.R. 1,  cyto_pero 1  (predict for XP_069152342.1)
Subcellular
localization
TargetP
other 9  (predict for XP_004234380.1)
other 9  (predict for XP_010317588.1)
other 9  (predict for XP_010317590.1)
other 9  (predict for XP_069152338.1)
other 9  (predict for XP_069152339.1)
other 9  (predict for XP_069152340.1)
other 9  (predict for XP_069152342.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101246600
sly-r.6
for
101246600
sly-u.5
for
101247698
sly-u.5
for
101247404
sot-r.1
for
102604312
sot-r.1
for
102597651
sot-r.1
for
107062699
nta-r.1
for
107770472
nta-r.1
for
107823236
ath-u.5
for
AT3G48880
gma-u.5
for
100791249
gma-u.5
for
100789355
bra-r.6
for
103873111
bra-r.6
for
103874908
vvi-u.5
for
100248117
ppo-u.5
for
7454486
ppo-u.5
for
7484395
mtr-u.5
for
25485083
mtr-u.5
for
25485084
ghi-r.1
for
107936083
ghi-r.1
for
107892071
bna-r.1
for
106347454
bna-r.1
for
106368666
bna-r.1
for
106447520
cit-r.1
for
102630101
osa-u.5
for
4349047
zma-u.5
for
100273810
tae-r.2
for
123181206
tae-r.2
for
123123262
tae-r.2
for
123047787
hvu-r.1
for
123433348
sbi-r.1
for
8067083
bdi-r.1
for
100828504


Ortholog ID: 5773
Species sly sly sly sot sot sot nta nta ath gma gma bra bra vvi ppo ppo mtr mtr ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC101246600 LOC101247698 LOC101247404 LOC102604312 LOC102597651 LOC102600704 LOC107770472 LOC107823236 AT3G48880 LOC100791249 LOC100789355 LOC103873111 LOC103874908 LOC100248117 LOC7454486 LOC7484395 LOC25485083 LOC25485084 LOC107936083 LOC107892071 LOC106347454 LOC106368666 LOC106447520 LOC102630101 LOC4349047 LOC100273810 LOC123181206 LOC123123262 LOC123047787 LOC123433348 LOC8067083 LOC100828504
Function* F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880-like F-box/LRR-repeat protein At3g48880-like F-box/LRR-repeat protein At3g48880-like F-box/LRR-repeat protein At3g48880-like F-box/LRR-repeat protein At3g48880-like F-box/LRR-repeat protein At3g48880 RNI-like superfamily protein F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880-like F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880-like F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 uncharacterized LOC100273810 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03082 ATP-dependent chromatin remodeling 2
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00513 Various types of N-glycan biosynthesis 4
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00513 Various types of N-glycan biosynthesis 4
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr03083 Polycomb repressive complex 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101246600 101247698 101247404 102604312 102597651 102600704 107770472 107823236 824049 100791249 100789355 103873111 103874908 100248117 7454486 7484395 25485083 25485084 107936083 107892071 106347454 106368666 106447520 102630101 4349047 100273810 123181206 123123262 123047787 123433348 8067083 100828504
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