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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7454486   F-box/LRR-repeat protein At3g48880 
 ppo-r.4   7454486   F-box/LRR-repeat protein At3g48880 
 ppo-u.5   7484395   F-box/LRR-repeat protein At3g48880 
 gma-u.5   100791249   F-box/LRR-repeat protein At3g48880 
 gma-u.5   100789355   F-box/LRR-repeat protein At3g48880 
 mtr-u.5   25485084   F-box/LRR-repeat protein At3g48880 
 mtr-u.5   25485083   F-box/LRR-repeat protein At3g48880 
 ath-u.5   AT3G48880   RNI-like superfamily protein 
 vvi-u.5   100248117   F-box/LRR-repeat protein At3g48880-like 
 sly-u.5   101247698   F-box/LRR-repeat protein At3g48880 
 sly-u.5   101247404   F-box/LRR-repeat protein At3g48880-like 
 sly-u.5   101246600   F-box/LRR-repeat protein At3g48880 
 osa-u.5   4349047   F-box/LRR-repeat protein At3g48880 
 zma-u.5   100273810   uncharacterized LOC100273810 

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Top 50 coexpressed genes to 7454486 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7454486 (ppo-u.5 coexpression data)

CoexMap"7454486"


ppoLOC7454486 | Entrez gene ID : 7454486    
Species ppo gma mtr ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 2 1 1 3 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002321893.2 [sequence] [blastp]
XP_024441923.1 [sequence] [blastp]
XP_024441924.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3  (predict for XP_002321893.2)
cyto 7,  nucl 1,  mito 1,  plas 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_024441923.1)
cyto 6,  nucl 2,  mito 1,  plas 1,  mito_plas 1  (predict for XP_024441924.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002321893.2)
other 9  (predict for XP_024441923.1)
other 9  (predict for XP_024441924.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7454486
ppo-r.4
for
7454486
ppo-u.5
for
7484395
gma-u.5
for
100791249
gma-u.5
for
100789355
mtr-u.5
for
25485084
mtr-u.5
for
25485083
ath-u.5
for
AT3G48880
vvi-u.5
for
100248117
sly-u.5
for
101247698
sly-u.5
for
101247404
sly-u.5
for
101246600
osa-u.5
for
4349047
zma-u.5
for
100273810


Ortholog ID: 5773
Species ppo ppo gma gma mtr mtr ath bra bra vvi ghi ghi bna bna cit sly sly sot sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC7454486 LOC7484395 LOC100789355 LOC100791249 LOC25485083 LOC25485084 AT3G48880 LOC103873111 LOC103874908 LOC100248117 LOC107936083 LOC107892071 LOC106368666 LOC106447520 LOC102630101 LOC101246600 LOC101247404 LOC102600704 LOC102597651 LOC107770472 LOC107823236 LOC4349047 LOC100273810 LOC123123262 LOC123047787 LOC123433348 LOC8067083 LOC100828504
Function* F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 RNI-like superfamily protein F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880-like F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880-like F-box/LRR-repeat protein At3g48880-like F-box/LRR-repeat protein At3g48880-like F-box/LRR-repeat protein At3g48880-like F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 uncharacterized LOC100273810 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880 F-box/LRR-repeat protein At3g48880
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr03083 Polycomb repressive complex 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03082 ATP-dependent chromatin remodeling 2
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00513 Various types of N-glycan biosynthesis 4
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00513 Various types of N-glycan biosynthesis 4
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7454486 7484395 100789355 100791249 25485083 25485084 824049 103873111 103874908 100248117 107936083 107892071 106368666 106447520 102630101 101246600 101247404 102600704 102597651 107770472 107823236 4349047 100273810 123123262 123047787 123433348 8067083 100828504
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