ATTED-II : GeneCoexpression result

Species	Gene	Description
sly-u.5	101247093	proteasome subunit alpha type-5
sly-r.6	101247093	proteasome subunit alpha type-5
sly-u.5	101266742	proteasome subunit alpha type-5
ath-u.5	PAE2	20S proteasome alpha subunit E2
ath-u.5	PAE1	20S proteasome alpha subunit E1
gma-u.5	PAE1	20S proteasome subunit
gma-u.5	100799919	proteasome subunit alpha type-5-like
gma-u.5	100796147	proteasome subunit alpha type-5
vvi-u.5	100263432	proteasome subunit alpha type-5-like
ppo-u.5	7470748	proteasome subunit alpha type-5
ppo-u.5	18094673	proteasome subunit alpha type-5
mtr-u.5	25485590	proteasome subunit alpha type-5
osa-u.5	4350922	proteasome subunit alpha type-5-like
zma-u.5	100283546	proteasome subunit alpha type 5
zma-u.5	100282220	proteasome subunit alpha type 5

Annotation

functional annotation

KEGG

sly03050 [list] [network] Proteasome (52 genes)

GO BP

GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process

(132 genes)

IEA

GO CC

GO:0019773 [list] [network] proteasome core complex, alpha-subunit complex	(10 genes)	IEA
GO:0005839 [list] [network] proteasome core complex	(18 genes)	IEA
GO:0005634 [list] [network] nucleus	(2947 genes)	IEA

GO MF

Protein

XP_004233120.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 3, pero 3, cyto_pero 3

(predict for XP_004233120.1)

Subcellular
localization
TargetP

other 8, mito 3

(predict for XP_004233120.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101247093	sly-r.6 for 101247093	sly-u.5 for 101266742	ath-u.5 for PAE2	ath-u.5 for PAE1	gma-u.5 for PAE1	gma-u.5 for 100799919	gma-u.5 for 100796147	vvi-u.5 for 100263432	ppo-u.5 for 7470748	ppo-u.5 for 18094673	mtr-u.5 for 25485590	osa-u.5 for 4350922	zma-u.5 for 100283546	zma-u.5 for 100282220

Ortholog

Ortholog ID: 3100

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

PAE1

PAE2

PAE1

Function^*

proteasome subunit alpha type-5

proteasome subunit alpha type-5-like

20S proteasome alpha subunit E1

20S proteasome alpha subunit E2

20S proteasome subunit

uncharacterized LOC100499756

proteasome subunit alpha type-5-A

proteasome subunit alpha type-5-like

proteasome subunit alpha type-5

proteasome subunit alpha type-5-A

proteasome subunit alpha type-5

proteasome subunit alpha type-5-like

proteasome subunit alpha type 5

proteasome subunit alpha type-5

proteasome subunit alpha type-5-like

proteasome subunit alpha type-5

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	5
sot03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	9
nta03008	Ribosome biogenesis in eukaryotes	2
nta03013	Nucleocytoplasmic transport	2
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	5
nta00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03050	Proteasome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03050	Proteasome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03050	Proteasome	12
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	7
gma03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2
bra03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	5
bra03060	Protein export	3
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	18
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	13
mtr00510	N-Glycan biosynthesis	2
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	13
ghi03018	RNA degradation	2
ghi03040	Spliceosome	2
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	7
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	7
bna00100	Steroid biosynthesis	2
bna00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	7
cit03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	16
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	15
zma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	5
tae04145	Phagosome	5
tae03050	Proteasome	3
tae03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	4
tae03015	mRNA surveillance pathway	3
tae04382	Cornified envelope formation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	12
sbi03440	Homologous recombination	2
sbi00071	Fatty acid degradation	2
sbi00280	Valine, leucine and isoleucine degradation	2
sbi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	9
sbi04141	Protein processing in endoplasmic reticulum	3
sbi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	5
bdi04016	MAPK signaling pathway - plant	2
bdi04070	Phosphatidylinositol signaling system	2
bdi04075	Plant hormone signal transduction	2
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	18

Expression

Expression pattern

Entrez Gene ID^*

101266742

101247093

102583874

102599627

107805979

107806762

841822

820649

547598

100499756

103848506

103832649

100263432

18094673

7470748

25485590

107891756

107897671

106416418

106360399

102620751

4350922

100282220

100283546

123102779

123110972

123395874

123448546

8080549

8068293

100836191

100825853

5722748

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 101247093 (sly-u.5 coexpression data)

Top 50 enrichment test to 101247093 (sly-u.5 coexpression data)


Species	sly	ath	gma	vvi	ppo	mtr	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	2	3	1	2	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101247093 (sly-u.5 coexpression data)

Top 50 enrichment test to 101247093 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**