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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107897462   proteasome subunit alpha type-5 
 ghi-r.1   107940582   proteasome subunit alpha type-5 
 ghi-r.1   107913836   proteasome subunit alpha type-5 
 ghi-r.1   107891756   proteasome subunit alpha type-5 
 ath-u.5   PAE2   20S proteasome alpha subunit E2 
 ath-u.5   PAE1   20S proteasome alpha subunit E1 
 bra-r.6   103871106   proteasome subunit alpha type-5-A 
 bra-r.6   103848506   proteasome subunit alpha type-5-A 
 bra-r.6   103832649   proteasome subunit alpha type-5-A 
 bna-r.1   106416418   proteasome subunit alpha type-5-A 
 bna-r.1   125597392   proteasome subunit alpha type-5-A 
 bna-r.1   106345808   proteasome subunit alpha type-5-A 
 cit-r.1   102620751   proteasome subunit alpha type-5 
 gma-u.5   PAE1   20S proteasome subunit 
 gma-u.5   100799919   proteasome subunit alpha type-5-like 
 gma-u.5   100796147   proteasome subunit alpha type-5 
 vvi-u.5   100263432   proteasome subunit alpha type-5-like 
 ppo-u.5   7470748   proteasome subunit alpha type-5 
 ppo-u.5   18094673   proteasome subunit alpha type-5 
 mtr-u.5   25485590   proteasome subunit alpha type-5 
 sly-u.5   101247093   proteasome subunit alpha type-5 
 sly-u.5   101266742   proteasome subunit alpha type-5 
 sot-r.1   102583874   proteasome subunit alpha type-5 
 sot-r.1   102599627   proteasome subunit alpha type-5 
 nta-r.1   107799456   proteasome subunit alpha type-5 
 nta-r.1   107805624   proteasome subunit alpha type-5-like 
 nta-r.1   107805979   proteasome subunit alpha type-5 
 osa-u.5   4350922   proteasome subunit alpha type-5-like 
 zma-u.5   100283546   proteasome subunit alpha type 5 
 zma-u.5   100282220   proteasome subunit alpha type 5 
 tae-r.2   123110972   proteasome subunit alpha type-5 
 tae-r.2   123086185   proteasome subunit alpha type-5 
 tae-r.2   123097328   proteasome subunit alpha type-5 
 hvu-r.1   123395874   proteasome subunit alpha type-5 
 hvu-r.1   123448546   proteasome subunit alpha type-5-like 
 sbi-r.1   8080549   proteasome subunit alpha type-5 
 sbi-r.1   8068293   proteasome subunit alpha type-5 
 bdi-r.1   100836191   proteasome subunit alpha type-5 
 bdi-r.1   100825853   proteasome subunit alpha type-5 
 cre-r.1   CHLRE_17g724350v5   uncharacterized protein 

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Top 50 coexpressed genes to 107897462 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107897462 (ghi-r.1 coexpression data)

CoexMap"107897462"


ghiLOC107897462 | Entrez gene ID : 107897462    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 3 1 2 1 2 2 3 1 2 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03050 [list] [network] Proteasome (162 genes)
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (406 genes)  IEA  
GO CC
GO:0019773 [list] [network] proteasome core complex, alpha-subunit complex  (37 genes)  IEA  
GO:0005839 [list] [network] proteasome core complex  (69 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
Protein XP_016678419.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_016678419.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_016678419.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107897462
ghi-r.1
for
107940582
ghi-r.1
for
107913836
ghi-r.1
for
107891756
ath-u.5
for
PAE2
ath-u.5
for
PAE1
bra-r.6
for
103871106
bra-r.6
for
103848506
bra-r.6
for
103832649
bna-r.1
for
106416418
bna-r.1
for
125597392
bna-r.1
for
106345808
cit-r.1
for
102620751
gma-u.5
for
PAE1
gma-u.5
for
100799919
gma-u.5
for
100796147
vvi-u.5
for
100263432
ppo-u.5
for
7470748
ppo-u.5
for
18094673
mtr-u.5
for
25485590
sly-u.5
for
101247093
sly-u.5
for
101266742
sot-r.1
for
102583874
sot-r.1
for
102599627
nta-r.1
for
107799456
nta-r.1
for
107805624
nta-r.1
for
107805979
osa-u.5
for
4350922
zma-u.5
for
100283546
zma-u.5
for
100282220
tae-r.2
for
123110972
tae-r.2
for
123086185
tae-r.2
for
123097328
hvu-r.1
for
123395874
hvu-r.1
for
123448546
sbi-r.1
for
8080549
sbi-r.1
for
8068293
bdi-r.1
for
100836191
bdi-r.1
for
100825853
cre-r.1
for
CHLRE_17g724350v5


Ortholog ID: 3100
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107913836 LOC107891756 LOC107897671 PAE2 PAE1 LOC103871106 LOC103848506 LOC103832649 LOC106416418 LOC106345808 LOC106360399 LOC102620751 PAE1 LOC100799919 LOC100499756 LOC100263432 LOC7470748 LOC18094673 LOC25485590 LOC101247093 LOC101266742 LOC102583874 LOC102599627 LOC107805979 LOC107806762 LOC107814220 LOC4350922 LOC100283546 LOC100282220 LOC123110972 LOC123086185 LOC123102779 LOC123395874 LOC123448546 LOC8080549 LOC8068293 LOC100836191 LOC100825853 CHLRE_17g724350v5
Function* proteasome subunit alpha type-5 proteasome subunit alpha type-5 proteasome subunit alpha type-5 20S proteasome alpha subunit E2 20S proteasome alpha subunit E1 proteasome subunit alpha type-5-A proteasome subunit alpha type-5-A proteasome subunit alpha type-5-A proteasome subunit alpha type-5-A proteasome subunit alpha type-5-A proteasome subunit alpha type-5-A proteasome subunit alpha type-5 20S proteasome subunit proteasome subunit alpha type-5-like uncharacterized LOC100499756 proteasome subunit alpha type-5-like proteasome subunit alpha type-5 proteasome subunit alpha type-5 proteasome subunit alpha type-5 proteasome subunit alpha type-5 proteasome subunit alpha type-5 proteasome subunit alpha type-5 proteasome subunit alpha type-5 proteasome subunit alpha type-5 proteasome subunit alpha type-5-like proteasome subunit alpha type-5 proteasome subunit alpha type-5-like proteasome subunit alpha type 5 proteasome subunit alpha type 5 proteasome subunit alpha type-5 proteasome subunit alpha type-5 proteasome subunit alpha type-5 proteasome subunit alpha type-5 proteasome subunit alpha type-5-like proteasome subunit alpha type-5 proteasome subunit alpha type-5 proteasome subunit alpha type-5 proteasome subunit alpha type-5 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 13
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 16
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 5
bra03060 Protein export 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna04122 Sulfur relay system 2
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna00100 Steroid biosynthesis 2
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 7
cit03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 12
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
gma03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 18
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 13
mtr00510 N-Glycan biosynthesis 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 5
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 9
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 5
nta00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 16
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 15
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 4
tae03015 mRNA surveillance pathway 3
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
tae04016 MAPK signaling pathway - plant 3
tae04070 Phosphatidylinositol signaling system 3
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 5
tae04145 Phagosome 5
tae03050 Proteasome 3
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 12
sbi03440 Homologous recombination 2
sbi00071 Fatty acid degradation 2
sbi00280 Valine, leucine and isoleucine degradation 2
sbi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 9
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 5
bdi04016 MAPK signaling pathway - plant 2
bdi04070 Phosphatidylinositol signaling system 2
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 18
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107913836 107891756 107897671 820649 841822 103871106 103848506 103832649 106416418 106345808 106360399 102620751 547598 100799919 100499756 100263432 7470748 18094673 25485590 101247093 101266742 102583874 102599627 107805979 107806762 107814220 4350922 100283546 100282220 123110972 123086185 123102779 123395874 123448546 8080549 8068293 100836191 100825853 5722748
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