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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101247495   E3 ubiquitin-protein ligase RSL1 
 sly-r.6   101247495   E3 ubiquitin-protein ligase RSL1 
 sly-u.5   101243987   E3 ubiquitin-protein ligase RSL1-like 
 sly-u.5   101250202   E3 ubiquitin-protein ligase RSL1 
 vvi-u.5   100252570   E3 ubiquitin-protein ligase RSL1 
 vvi-u.5   100256964   E3 ubiquitin-protein ligase RSL1 
 ppo-u.5   7467917   uncharacterized LOC7467917 
 ppo-u.5   18094363   E3 ubiquitin-protein ligase RSL1 
 osa-u.5   4347079   uncharacterized LOC4347079 
 zma-u.5   100194163   putative RING zinc finger domain superfamily protein 
 zma-u.5   100280727   ubiquitin-protein ligase/ zinc ion binding protein 

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Top 50 coexpressed genes to 101247495 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101247495 (sly-u.5 coexpression data)

CoexMap"101247495"


slyLOC101247495 | Entrez gene ID : 101247495      
Species sly vvi ppo osa zma cre mtr ghi cit hvu bdi sot bra sbi tae ath nta gma bna
Paralog 4 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (30 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (83 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (283 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (148 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0031624 [list] [network] ubiquitin conjugating enzyme binding  (27 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (194 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
Protein XP_004234247.2 [sequence] [blastp]
XP_010317421.2 [sequence] [blastp]
XP_010317422.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  chlo 2,  nucl 2,  extr 1,  nucl_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_004234247.2)
nucl 3,  cyto 2,  extr 2,  chlo 1,  cysk_nucl 1,  cyto_plas 1  (predict for XP_010317421.2)
nucl 3,  cyto 2,  extr 2,  chlo 1,  cysk_nucl 1,  cyto_plas 1  (predict for XP_010317422.2)
Subcellular
localization
TargetP
scret 9  (predict for XP_004234247.2)
scret 9  (predict for XP_010317421.2)
scret 9  (predict for XP_010317422.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101247495

.
sly-r.6
for
101247495

.
sly-u.5
for
101243987

.
sly-u.5
for
101250202

.
vvi-u.5
for
100252570

.
vvi-u.5
for
100256964

.
ppo-u.5
for
7467917

.
ppo-u.5
for
18094363

.
osa-u.5
for
4347079

.
zma-u.5
for
100194163

.
zma-u.5
for
100280727

.


Ortholog ID: 369
Species sly sly zma zma vvi ppo ppo mtr hvu ghi ghi cre cre sbi sbi sot cit bdi nta
Symbol LOC101247495 LOC101249062 LOC100381983 LOC100194163 LOC100252570 LOC18094363 LOC7467917 LOC25486596 LOC123431232 LOC107907073 LOC107958821 CHLRE_01g060712v5 CHLRE_03g150850v5 LOC8062109 LOC8062110 LOC102585890 LOC102618889 LOC100827708 LOC107792398
Function* E3 ubiquitin-protein ligase RSL1 E3 ubiquitin-protein ligase RSL1-like putative RING zinc finger domain superfamily protein putative RING zinc finger domain superfamily protein E3 ubiquitin-protein ligase RSL1 E3 ubiquitin-protein ligase RSL1 uncharacterized LOC7467917 probable E3 ubiquitin-protein ligase RNF217 uncharacterized LOC123431232 ranBP-type and C3HC4-type zinc finger-containing protein 1 probable E3 ubiquitin-protein ligase RNF217 uncharacterized protein uncharacterized protein uncharacterized LOC8062109 probable E3 ubiquitin-protein ligase RNF144A-B probable E3 ubiquitin-protein ligase RNF217 E3 ubiquitin-protein ligase RSL1-like uncharacterized protein DDB_G0292642 E3 ubiquitin-protein ligase RSL1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 3
ppo03420 Nucleotide excision repair 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03013 Nucleocytoplasmic transport 4
mtr03020 RNA polymerase 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 2
cre03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101247495 101249062 100381983 100194163 100252570 18094363 7467917 25486596 123431232 107907073 107958821 5725742 5721143 8062109 8062110 102585890 102618889 100827708 107792398
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