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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101247890   uncharacterized LOC101247890 
 sly-r.6   101247890   uncharacterized LOC101247890 
 ath-u.5   AT3G13180   NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein 
 gma-u.5   100779327   probable ribosomal RNA small subunit methyltransferase B 
 vvi-u.5   100253242   uncharacterized LOC100253242 
 ppo-u.5   7485114   uncharacterized LOC7485114 
 mtr-u.5   11426017   probable ribosomal RNA small subunit methyltransferase B 
 osa-u.5   4347368   uncharacterized LOC4347368 
 zma-u.5   100280262   uncharacterized LOC100280262 

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Top 50 coexpressed genes to 101247890 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101247890 (sly-u.5 coexpression data)

CoexMap"101247890"


slyLOC101247890 | Entrez gene ID : 101247890      
Species sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001510 [list] [network] RNA methylation  (52 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (194 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1608 genes)  IEA  
GO CC
GO MF
GO:0008649 [list] [network] rRNA methyltransferase activity  (19 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
Protein XP_004251938.1 [sequence] [blastp]
XP_010313937.1 [sequence] [blastp]
XP_010313938.1 [sequence] [blastp]
XP_010313939.1 [sequence] [blastp]
XP_025884377.1 [sequence] [blastp]
XP_069148955.1 [sequence] [blastp]
XP_069148956.1 [sequence] [blastp]
XP_069148957.1 [sequence] [blastp]
XP_069148958.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 1,  nucl 1,  mito 1  (predict for XP_004251938.1)
cyto 7,  chlo 1,  nucl 1,  mito 1  (predict for XP_010313937.1)
cyto 4,  chlo 3,  nucl 3  (predict for XP_010313938.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_010313939.1)
cyto 6,  nucl 2,  chlo 1  (predict for XP_025884377.1)
cyto 6,  nucl 2,  chlo 1  (predict for XP_069148955.1)
cyto 4,  chlo 3,  nucl 3  (predict for XP_069148956.1)
cyto 4,  nucl 3,  chlo 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_069148957.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_069148958.1)
Subcellular
localization
TargetP
other 3,  chlo 3  (predict for XP_004251938.1)
other 3,  chlo 3  (predict for XP_010313937.1)
other 3,  chlo 3  (predict for XP_010313938.1)
other 3,  chlo 3  (predict for XP_010313939.1)
other 3,  chlo 3  (predict for XP_025884377.1)
other 3,  chlo 3  (predict for XP_069148955.1)
other 3,  chlo 3  (predict for XP_069148956.1)
other 3,  chlo 3  (predict for XP_069148957.1)
other 3,  chlo 3  (predict for XP_069148958.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101247890
sly-r.6
for
101247890
ath-u.5
for
AT3G13180
gma-u.5
for
100779327
vvi-u.5
for
100253242
ppo-u.5
for
7485114
mtr-u.5
for
11426017
osa-u.5
for
4347368
zma-u.5
for
100280262


Ortholog ID: 10763
Species sly sot nta nta ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi cre
Symbol LOC101247890 LOC102595970 LOC107766162 LOC107820730 AT3G13180 LOC100779327 LOC103849752 LOC100253242 LOC7485114 LOC11426017 LOC107952987 LOC107920991 LOC106377518 LOC111199218 LOC102629461 LOC4347368 LOC100280262 LOC123104082 LOC123112306 LOC123399157 LOC8083285 LOC100845015 CHLRE_50g761447v5
Function* uncharacterized LOC101247890 ribosomal RNA small subunit methyltransferase B uncharacterized LOC107766162 uncharacterized LOC107820730 NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B uncharacterized LOC100253242 uncharacterized LOC7485114 probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B uncharacterized LOC102629461 uncharacterized LOC4347368 uncharacterized LOC100280262 probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 5
nta03015 mRNA surveillance pathway 2
nta00450 Selenocompound metabolism 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03015 mRNA surveillance pathway 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101247890 102595970 107766162 107820730 820508 100779327 103849752 100253242 7485114 11426017 107952987 107920991 106377518 111199218 102629461 4347368 100280262 123104082 123112306 123399157 8083285 100845015 66057397
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