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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111199218   probable ribosomal RNA small subunit methyltransferase B 
 bna-r.1   106377518   probable ribosomal RNA small subunit methyltransferase B 
 bra-r.6   103849752   probable ribosomal RNA small subunit methyltransferase B 
 ath-u.5   AT3G13180   NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein 
 ghi-r.1   107920991   probable ribosomal RNA small subunit methyltransferase B 
 ghi-r.1   107952987   probable ribosomal RNA small subunit methyltransferase B 
 cit-r.1   102629461   uncharacterized LOC102629461 
 gma-u.5   100779327   probable ribosomal RNA small subunit methyltransferase B 
 vvi-u.5   100253242   uncharacterized LOC100253242 
 ppo-u.5   7485114   uncharacterized LOC7485114 
 mtr-u.5   11426017   probable ribosomal RNA small subunit methyltransferase B 
 sly-u.5   101247890   uncharacterized LOC101247890 
 sot-r.1   102595970   ribosomal RNA small subunit methyltransferase B 
 nta-r.1   107820730   uncharacterized LOC107820730 
 nta-r.1   107766162   uncharacterized LOC107766162 
 osa-u.5   4347368   uncharacterized LOC4347368 
 zma-u.5   100280262   uncharacterized LOC100280262 
 tae-r.2   123112306   probable ribosomal RNA small subunit methyltransferase B 
 tae-r.2   123121828   probable ribosomal RNA small subunit methyltransferase B 
 tae-r.2   123104082   probable ribosomal RNA small subunit methyltransferase B 
 hvu-r.1   123399157   probable ribosomal RNA small subunit methyltransferase B 
 sbi-r.1   8083285   probable ribosomal RNA small subunit methyltransferase B 
 bdi-r.1   100845015   probable ribosomal RNA small subunit methyltransferase B 
 cre-r.1   CHLRE_50g761447v5   uncharacterized protein 

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Top 50 coexpressed genes to 111199218 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111199218 (bna-r.1 coexpression data)

CoexMap"111199218"


bnaLOC111199218 | Entrez gene ID : 111199218    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001510 [list] [network] RNA methylation  (170 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5322 genes)  IEA  
GO CC
GO MF
GO:0008168 [list] [network] methyltransferase activity  (844 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_022544446.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 4,  mito 1  (predict for XP_022544446.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_022544446.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111199218
bna-r.1
for
106377518
bra-r.6
for
103849752
ath-u.5
for
AT3G13180
ghi-r.1
for
107920991
ghi-r.1
for
107952987
cit-r.1
for
102629461
gma-u.5
for
100779327
vvi-u.5
for
100253242
ppo-u.5
for
7485114
mtr-u.5
for
11426017
sly-u.5
for
101247890
sot-r.1
for
102595970
nta-r.1
for
107820730
nta-r.1
for
107766162
osa-u.5
for
4347368
zma-u.5
for
100280262
tae-r.2
for
123112306
tae-r.2
for
123121828
tae-r.2
for
123104082
hvu-r.1
for
123399157
sbi-r.1
for
8083285
bdi-r.1
for
100845015
cre-r.1
for
CHLRE_50g761447v5


Ortholog ID: 10763
Species bna bna bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC111199218 LOC106377518 LOC103849752 AT3G13180 LOC107920991 LOC107952987 LOC102629461 LOC100779327 LOC100253242 LOC7485114 LOC11426017 LOC101247890 LOC102595970 LOC107820730 LOC107766162 LOC4347368 LOC100280262 LOC123112306 LOC123121828 LOC123104082 LOC123399157 LOC8083285 LOC100845015 CHLRE_50g761447v5
Function* probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B uncharacterized LOC102629461 probable ribosomal RNA small subunit methyltransferase B uncharacterized LOC100253242 uncharacterized LOC7485114 probable ribosomal RNA small subunit methyltransferase B uncharacterized LOC101247890 ribosomal RNA small subunit methyltransferase B uncharacterized LOC107820730 uncharacterized LOC107766162 uncharacterized LOC4347368 uncharacterized LOC100280262 probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B probable ribosomal RNA small subunit methyltransferase B uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03015 mRNA surveillance pathway 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 5
nta03015 mRNA surveillance pathway 2
nta00450 Selenocompound metabolism 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111199218 106377518 103849752 820508 107920991 107952987 102629461 100779327 100253242 7485114 11426017 101247890 102595970 107820730 107766162 4347368 100280262 123112306 123121828 123104082 123399157 8083285 100845015 66057397
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