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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101251838   uncharacterized LOC101251838 
 sly-r.6   101251838   uncharacterized LOC101251838 
 sot-r.1   102597650   uncharacterized tRNA/rRNA methyltransferase YsgA 
 nta-r.1   107772732   uncharacterized LOC107772732 
 ath-u.5   AT4G38020   tRNA/rRNA methyltransferase (SpoU) family protein 
 gma-u.5   100792782   uncharacterized LOC100792782 
 bra-r.6   103856150   uncharacterized tRNA/rRNA methyltransferase YsgA 
 vvi-u.5   100259536   uncharacterized LOC100259536 
 ppo-u.5   7476427   uncharacterized LOC7476427 
 mtr-u.5   11441513   uncharacterized tRNA/rRNA methyltransferase slr1673 
 ghi-r.1   107913380   uncharacterized tRNA/rRNA methyltransferase YsgA 
 ghi-r.1   107897530   uncharacterized tRNA/rRNA methyltransferase YsgA 
 bna-r.1   106436073   uncharacterized tRNA/rRNA methyltransferase YsgA 
 bna-r.1   106439583   uncharacterized tRNA/rRNA methyltransferase YsgA-like 
 cit-r.1   102619635   uncharacterized LOC102619635 
 osa-u.5   4333747   uncharacterized LOC4333747 
 zma-u.5   100193597   spoU rRNA Methylase family protein 
 tae-r.2   123095711   uncharacterized tRNA/rRNA methyltransferase YsgA 
 tae-r.2   123090700   uncharacterized tRNA/rRNA methyltransferase YsgA 
 hvu-r.1   123447173   uncharacterized tRNA/rRNA methyltransferase YsgA 
 sbi-r.1   8054161   uncharacterized tRNA/rRNA methyltransferase YsgA 
 bdi-r.1   100826405   uncharacterized tRNA/rRNA methyltransferase YsgA 
 cre-r.1   CHLRE_17g744947v5   uncharacterized protein 

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Top 50 coexpressed genes to 101251838 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101251838 (sly-u.5 coexpression data)

CoexMap"101251838"


slyLOC101251838 | Entrez gene ID : 101251838      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 1 1 1 1 1 2 2 1 1 1 2 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006396 [list] [network] RNA processing  (611 genes)  IEA  
GO CC
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (54 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
Protein XP_004250164.1 [sequence] [blastp]
XP_069147713.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_004250164.1)
chlo 4,  mito 3,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_069147713.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_004250164.1)
chlo 6  (predict for XP_069147713.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101251838
sly-r.6
for
101251838
sot-r.1
for
102597650
nta-r.1
for
107772732
ath-u.5
for
AT4G38020
gma-u.5
for
100792782
bra-r.6
for
103856150
vvi-u.5
for
100259536
ppo-u.5
for
7476427
mtr-u.5
for
11441513
ghi-r.1
for
107913380
ghi-r.1
for
107897530
bna-r.1
for
106436073
bna-r.1
for
106439583
cit-r.1
for
102619635
osa-u.5
for
4333747
zma-u.5
for
100193597
tae-r.2
for
123095711
tae-r.2
for
123090700
hvu-r.1
for
123447173
sbi-r.1
for
8054161
bdi-r.1
for
100826405
cre-r.1
for
CHLRE_17g744947v5


Ortholog ID: 11387
Species sly sot nta ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi cre
Symbol LOC101251838 LOC102597650 LOC107772732 AT4G38020 LOC100792782 LOC103856150 LOC100259536 LOC7476427 LOC11441513 LOC107913380 LOC107897530 LOC106436073 LOC106439583 LOC102619635 LOC4333747 LOC100193597 LOC123095711 LOC123090700 LOC123447173 LOC8054161 LOC100826405 CHLRE_17g744947v5
Function* uncharacterized LOC101251838 uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized LOC107772732 tRNA/rRNA methyltransferase (SpoU) family protein uncharacterized LOC100792782 uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized LOC100259536 uncharacterized LOC7476427 uncharacterized tRNA/rRNA methyltransferase slr1673 uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized tRNA/rRNA methyltransferase YsgA-like uncharacterized LOC102619635 uncharacterized LOC4333747 spoU rRNA Methylase family protein uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00340 Histidine metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00785 Lipoic acid metabolism 3
ppo01240 Biosynthesis of cofactors 3
ppo00061 Fatty acid biosynthesis 3
ppo01212 Fatty acid metabolism 3
ppo00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 3
bna00290 Valine, leucine and isoleucine biosynthesis 2
bna00650 Butanoate metabolism 2
bna00660 C5-Branched dibasic acid metabolism 2
bna00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 4
bna00290 Valine, leucine and isoleucine biosynthesis 2
bna00650 Butanoate metabolism 2
bna00660 C5-Branched dibasic acid metabolism 2
bna00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101251838 102597650 107772732 829958 100792782 103856150 100259536 7476427 11441513 107913380 107897530 106436073 106439583 102619635 4333747 100193597 123095711 123090700 123447173 8054161 100826405 66057209
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