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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7476427   uncharacterized LOC7476427 
 ppo-r.4   7476427   uncharacterized LOC7476427 
 ppo-m.4   7476427   uncharacterized LOC7476427 
 gma-u.5   100792782   uncharacterized LOC100792782 
 mtr-u.5   11441513   uncharacterized tRNA/rRNA methyltransferase slr1673 
 ath-u.5   AT4G38020   tRNA/rRNA methyltransferase (SpoU) family protein 
 vvi-u.5   100259536   uncharacterized LOC100259536 
 sly-u.5   101251838   uncharacterized LOC101251838 
 osa-u.5   4333747   uncharacterized LOC4333747 
 zma-u.5   100193597   spoU rRNA Methylase family protein 

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Top 50 coexpressed genes to 7476427 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7476427 (ppo-u.5 coexpression data)

CoexMap"7476427"


ppoLOC7476427 | Entrez gene ID : 7476427    
Species ppo gma mtr ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006396 [list] [network] RNA processing  (703 genes)  IEA  
GO CC
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (53 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_024456599.2 [sequence] [blastp]
XP_052308691.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1  (predict for XP_024456599.2)
chlo 9  (predict for XP_052308691.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_024456599.2)
other 5,  mito 4  (predict for XP_052308691.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7476427
ppo-r.4
for
7476427
ppo-m.4
for
7476427
gma-u.5
for
100792782
mtr-u.5
for
11441513
ath-u.5
for
AT4G38020
vvi-u.5
for
100259536
sly-u.5
for
101251838
osa-u.5
for
4333747
zma-u.5
for
100193597


Ortholog ID: 11387
Species ppo gma mtr ath bra vvi ghi ghi bna bna cit sly sot nta osa zma tae hvu sbi bdi cre
Symbol LOC7476427 LOC100792782 LOC11441513 AT4G38020 LOC103856150 LOC100259536 LOC107913380 LOC107897530 LOC106439583 LOC106436073 LOC102619635 LOC101251838 LOC102597650 LOC107772732 LOC4333747 LOC100193597 LOC123090700 LOC123447173 LOC8054161 LOC100826405 CHLRE_17g744947v5
Function* uncharacterized LOC7476427 uncharacterized LOC100792782 uncharacterized tRNA/rRNA methyltransferase slr1673 tRNA/rRNA methyltransferase (SpoU) family protein uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized LOC100259536 uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized tRNA/rRNA methyltransferase YsgA-like uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized LOC102619635 uncharacterized LOC101251838 uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized LOC107772732 uncharacterized LOC4333747 spoU rRNA Methylase family protein uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized tRNA/rRNA methyltransferase YsgA uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00785 Lipoic acid metabolism 3
ppo01240 Biosynthesis of cofactors 3
ppo00061 Fatty acid biosynthesis 3
ppo01212 Fatty acid metabolism 3
ppo00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 4
bna00290 Valine, leucine and isoleucine biosynthesis 2
bna00650 Butanoate metabolism 2
bna00660 C5-Branched dibasic acid metabolism 2
bna00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 3
bna00290 Valine, leucine and isoleucine biosynthesis 2
bna00650 Butanoate metabolism 2
bna00660 C5-Branched dibasic acid metabolism 2
bna00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00340 Histidine metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7476427 100792782 11441513 829958 103856150 100259536 107913380 107897530 106439583 106436073 102619635 101251838 102597650 107772732 4333747 100193597 123090700 123447173 8054161 100826405 66057209
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