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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101254101   uncharacterized LOC101254101 
 sly-r.6   101254101   uncharacterized LOC101254101 
 sly-m.5   101254101   uncharacterized LOC101254101 
 ath-u.5   AT5G59830   DNA-binding protein 
 gma-u.5   100819317   uncharacterized LOC100819317 
 gma-u.5   100802229   uncharacterized LOC100802229 
 gma-u.5   100787520   uncharacterized LOC100787520 
 vvi-u.5   100260456   uncharacterized LOC100260456 
 ppo-u.5   7457924   uncharacterized LOC7457924 
 ppo-u.5   7489593   uncharacterized LOC7489593 
 ppo-u.5   7489275   uncharacterized LOC7489275 
 mtr-u.5   11410178   uncharacterized LOC11410178 
 mtr-u.5   11438298   uncharacterized LOC11438298 

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Top 50 coexpressed genes to 101254101 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101254101 (sly-u.5 coexpression data)

CoexMap"101254101"


slyLOC101254101 | Entrez gene ID : 101254101      
Species sly ath gma vvi ppo mtr hvu osa sot tae nta bra cit ghi zma bna bdi sbi cre
Paralog 3 1 3 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (133 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0042393 [list] [network] histone binding  (63 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (150 genes)  IEA  
GO:0000977 [list] [network] RNA polymerase II transcription regulatory region sequence-specific DNA binding  (306 genes)  IEA  
Protein XP_004241246.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_004241246.1)
Subcellular
localization
TargetP
other 8  (predict for XP_004241246.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101254101

.
sly-r.6
for
101254101

.
sly-m.5
for
101254101

.
ath-u.5
for
AT5G59830

.
gma-u.5
for
100819317

.
gma-u.5
for
100802229

.
gma-u.5
for
100787520

.
vvi-u.5
for
100260456

.
ppo-u.5
for
7457924

.
ppo-u.5
for
7489593

.
ppo-u.5
for
7489275

.
mtr-u.5
for
11410178

.
mtr-u.5
for
11438298

.


Ortholog ID: 9182
Species ath gma gma sly bra vvi ppo ppo mtr mtr ghi ghi bna bna sot cit nta nta
Symbol AT5G59830 LOC100787520 LOC100819317 LOC101254101 LOC103851542 LOC100260456 LOC7485723 LOC7489593 LOC11410178 LOC11438298 LOC107960087 LOC107959087 LOC106357797 LOC106385494 LOC102583417 LOC102624362 LOC107808368 LOC107826048
Function* DNA-binding protein uncharacterized LOC100787520 uncharacterized LOC100819317 uncharacterized LOC101254101 uncharacterized LOC103851542 uncharacterized LOC100260456 uncharacterized LOC7485723 uncharacterized LOC7489593 uncharacterized LOC11410178 uncharacterized LOC11438298 uncharacterized LOC107960087 uncharacterized LOC107959087 uncharacterized LOC106357797 uncharacterized LOC106385494 uncharacterized LOC102583417 uncharacterized LOC102624362 uncharacterized LOC107808368 uncharacterized LOC107826048
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta04075 Plant hormone signal transduction 2
nta04144 Endocytosis 2
nta04145 Phagosome 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta04075 Plant hormone signal transduction 2
nta04145 Phagosome 2
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836104 100787520 100819317 101254101 103851542 100260456 7485723 7489593 11410178 11438298 107960087 107959087 106357797 106385494 102583417 102624362 107808368 107826048
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