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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101254888   protein LEO1 homolog 
 sly-r.6   101254888   protein LEO1 homolog 
 sot-r.1   102594311   protein LEO1 homolog 
 nta-r.1   107763529   protein LEO1 homolog 
 nta-r.1   107765147   protein LEO1 homolog 
 ath-u.5   VIP4   leo1-like family protein 
 gma-u.5   100810965   protein LEO1 homolog 
 gma-u.5   100791454   protein LEO1 homolog 
 bra-r.6   103854937   protein LEO1 homolog 
 bra-r.6   103837369   protein LEO1 homolog 
 vvi-u.5   100260418   protein LEO1 homolog 
 vvi-u.5   100248444   protein LEO1 homolog 
 vvi-u.5   104880100   probable protein phosphatase 2C 55 
 ppo-u.5   7487124   protein LEO1 homolog 
 mtr-u.5   25488702   protein LEO1 homolog 
 mtr-u.5   25488701   protein LEO1 homolog 
 ghi-r.1   107951233   protein LEO1 homolog 
 ghi-r.1   121224466   protein LEO1 homolog 
 ghi-r.1   121219095   protein LEO1 homolog 
 bna-r.1   106382196   protein LEO1 homolog 
 bna-r.1   106444917   protein LEO1 homolog 
 bna-r.1   106366070   protein LEO1 homolog 
 cit-r.1   102619104   protein LEO1 homolog 
 osa-u.5   107276186   protein LEO1 homolog 
 osa-u.5   4342220   protein LEO1 homolog 
 osa-u.5   4352631   protein LEO1 homolog 
 zma-u.5   103631885   protein LEO1 homolog 
 zma-u.5   100279518   Protein LEO1-like protein 
 tae-r.2   123045119   protein LEO1 homolog 
 tae-r.2   123105068   protein LEO1 homolog 
 tae-r.2   123052955   protein LEO1 homolog 
 hvu-r.1   123426362   protein LEO1 homolog 
 hvu-r.1   123452293   protein LEO1 homolog 
 sbi-r.1   8054529   protein LEO1 homolog 
 bdi-r.1   100820835   protein LEO1 homolog 
 cre-r.1   CHLRE_16g694204v5   uncharacterized protein 

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Top 50 coexpressed genes to 101254888 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101254888 (sly-u.5 coexpression data)

CoexMap"101254888"


slyLOC101254888 | Entrez gene ID : 101254888    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 2 2 3 1 2 3 3 1 3 2 3 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032968 [list] [network] positive regulation of transcription elongation by RNA polymerase II  (19 genes)  IEA  
GO:0006368 [list] [network] transcription elongation by RNA polymerase II  (21 genes)  IEA  
GO CC
GO:0016593 [list] [network] Cdc73/Paf1 complex  (7 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:1990269 [list] [network] RNA polymerase II C-terminal domain phosphoserine binding  (2 genes)  IEA  
Protein XP_004235967.1 [sequence] [blastp]
XP_010318849.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for XP_004235967.1)
nucl 9,  cyto_nucl 5  (predict for XP_010318849.1)
Subcellular
localization
TargetP
other 8  (predict for XP_004235967.1)
other 8  (predict for XP_010318849.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101254888
sly-r.6
for
101254888
sot-r.1
for
102594311
nta-r.1
for
107763529
nta-r.1
for
107765147
ath-u.5
for
VIP4
gma-u.5
for
100810965
gma-u.5
for
100791454
bra-r.6
for
103854937
bra-r.6
for
103837369
vvi-u.5
for
100260418
vvi-u.5
for
100248444
vvi-u.5
for
104880100
ppo-u.5
for
7487124
mtr-u.5
for
25488702
mtr-u.5
for
25488701
ghi-r.1
for
107951233
ghi-r.1
for
121224466
ghi-r.1
for
121219095
bna-r.1
for
106382196
bna-r.1
for
106444917
bna-r.1
for
106366070
cit-r.1
for
102619104
osa-u.5
for
107276186
osa-u.5
for
4342220
osa-u.5
for
4352631
zma-u.5
for
103631885
zma-u.5
for
100279518
tae-r.2
for
123045119
tae-r.2
for
123105068
tae-r.2
for
123052955
hvu-r.1
for
123426362
hvu-r.1
for
123452293
sbi-r.1
for
8054529
bdi-r.1
for
100820835
cre-r.1
for
CHLRE_16g694204v5


Ortholog ID: 4454
Species sly sot nta nta ath gma gma bra bra vvi vvi vvi ppo mtr mtr ghi ghi ghi bna bna bna cit osa osa osa zma zma tae tae hvu hvu sbi bdi cre
Symbol LOC101254888 LOC102594311 LOC107763529 LOC107765147 VIP4 LOC100810965 LOC100791454 LOC103854937 LOC103837369 LOC100260418 LOC100248444 LOC104880100 LOC7487124 LOC25488702 LOC25488701 LOC121224466 LOC121219095 LOC107918353 LOC106382196 LOC106444917 LOC106366070 LOC102619104 LOC107276186 LOC4342220 LOC4352631 LOC103631885 LOC100279518 LOC123105068 LOC123188845 LOC123426362 LOC123452293 LOC8054529 LOC100820835 CHLRE_16g694204v5
Function* protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog leo1-like family protein protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog probable protein phosphatase 2C 55 protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog Protein LEO1-like protein protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog protein LEO1 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03015 mRNA surveillance pathway 5
gma03250 Viral life cycle - HIV-1 4
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna03015 mRNA surveillance pathway 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa04120 Ubiquitin mediated proteolysis 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101254888 102594311 107763529 107765147 836236 100810965 100791454 103854937 103837369 100260418 100248444 104880100 7487124 25488702 25488701 121224466 121219095 107918353 106382196 106444917 106366070 102619104 107276186 4342220 4352631 103631885 100279518 123105068 123188845 123426362 123452293 8054529 100820835 5724910
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