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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101257168   threonine--tRNA ligase, mitochondrial 1 
 sly-r.6   101257168   threonine--tRNA ligase, mitochondrial 1 
 sly-m.5   101257168   threonine--tRNA ligase, mitochondrial 1 
 sly-u.5   101244106   threonine--tRNA ligase, mitochondrial 1-like 
 ath-u.5   AT5G26830   Threonyl-tRNA synthetase 
 gma-u.5   100812652   threonine--tRNA ligase, mitochondrial 1 
 gma-u.5   100802879   threonine--tRNA ligase, mitochondrial 1 
 vvi-u.5   100258303   threonine--tRNA ligase, mitochondrial 1 
 vvi-u.5   100265542   threonine--tRNA ligase, mitochondrial 1 
 ppo-u.5   7471476   threonine--tRNA ligase, mitochondrial 1 
 ppo-u.5   18102530   threonine--tRNA ligase, mitochondrial 1-like 
 mtr-u.5   11405640   threonine--tRNA ligase, mitochondrial 1 
 osa-u.5   4345200   threonine--tRNA ligase, mitochondrial 1 
 zma-u.5   103643444   threonine--tRNA ligase, mitochondrial 1 
 zma-u.5   103626016   threonine--tRNA ligase, mitochondrial-like 

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Top 50 coexpressed genes to 101257168 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101257168 (sly-u.5 coexpression data)

CoexMap"101257168"


slyLOC101257168 | Entrez gene ID : 101257168      
Species sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 4 1 2 2 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00970 [list] [network] Aminoacyl-tRNA biosynthesis (114 genes)
GO BP
GO:0006435 [list] [network] threonyl-tRNA aminoacylation  (3 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (608 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (632 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0004829 [list] [network] threonine-tRNA ligase activity  (3 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1916 genes)  IEA  
Protein XP_004238685.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 3,  cyto_mito 2,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_004238685.1)
Subcellular
localization
TargetP
mito 7,  chlo 7  (predict for XP_004238685.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101257168
sly-r.6
for
101257168
sly-m.5
for
101257168
sly-u.5
for
101244106
ath-u.5
for
AT5G26830
gma-u.5
for
100812652
gma-u.5
for
100802879
vvi-u.5
for
100258303
vvi-u.5
for
100265542
ppo-u.5
for
7471476
ppo-u.5
for
18102530
mtr-u.5
for
11405640
osa-u.5
for
4345200
zma-u.5
for
103643444
zma-u.5
for
103626016


Ortholog ID: 5847
Species sly sly sot sot nta nta ath gma gma bra vvi vvi ppo ppo mtr ghi ghi bna bna cit osa zma zma tae tae hvu sbi bdi cre
Symbol LOC101244106 LOC101257168 LOC102584652 LOC102591931 LOC107789064 LOC107772352 AT5G26830 LOC100802879 LOC100812652 LOC103837192 LOC100265542 LOC100258303 LOC18102530 LOC7471476 LOC11405640 LOC107935514 LOC107945257 LOC106396274 LOC106440346 LOC102627861 LOC4345200 LOC103626016 LOC103643444 LOC123060089 LOC123068568 LOC123442662 LOC8057195 LOC100821121 CHLRE_06g273300v5
Function* threonine--tRNA ligase, mitochondrial 1-like threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1-like threonine--tRNA ligase, mitochondrial 1-like threonine--tRNA ligase, mitochondrial 1-like threonine--tRNA ligase, mitochondrial 1 Threonyl-tRNA synthetase threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1-like threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1-like threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial-like threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1 threonine--tRNA ligase, mitochondrial 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
sly03013 Nucleocytoplasmic transport 3
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03015 mRNA surveillance pathway 3
sot00970 Aminoacyl-tRNA biosynthesis 3
sot03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 9
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 9
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 6
gma00190 Oxidative phosphorylation 4
gma01200 Carbon metabolism 2
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 7
gma03008 Ribosome biogenesis in eukaryotes 3
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 8
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi00970 Aminoacyl-tRNA biosynthesis 4
vvi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo03460 Fanconi anemia pathway 2
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 8
ppo00020 Citrate cycle (TCA cycle) 3
ppo01200 Carbon metabolism 3
ppo00300 Lysine biosynthesis 3
ppo01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 6
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 6
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 7
bna03030 DNA replication 2
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 8
osa01230 Biosynthesis of amino acids 3
osa03013 Nucleocytoplasmic transport 2
osa03040 Spliceosome 2
osa00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 11
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 8
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 8
tae03013 Nucleocytoplasmic transport 4
tae03008 Ribosome biogenesis in eukaryotes 2
tae03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi00290 Valine, leucine and isoleucine biosynthesis 2
sbi00620 Pyruvate metabolism 2
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 5
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 6
cre01230 Biosynthesis of amino acids 4
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cre00290 Valine, leucine and isoleucine biosynthesis 2
cre01210 2-Oxocarboxylic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101244106 101257168 102584652 102591931 107789064 107772352 832741 100802879 100812652 103837192 100265542 100258303 18102530 7471476 11405640 107935514 107945257 106396274 106440346 102627861 4345200 103626016 103643444 123060089 123068568 123442662 8057195 100821121 5721795
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