Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101259109   pentatricopeptide repeat-containing protein At4g39952, mitochondrial 
 sly-r.6   101259109   pentatricopeptide repeat-containing protein At4g39952, mitochondrial 
 ath-u.5   AT4G39952   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100780090   pentatricopeptide repeat-containing protein At4g39952, mitochondrial 
 vvi-u.5   100242581   pentatricopeptide repeat-containing protein At4g39952, mitochondrial 
 mtr-u.5   11437091   pentatricopeptide repeat-containing protein At4g39952, mitochondrial 
 osa-u.5   112936052   pentatricopeptide repeat-containing protein At4g39952, mitochondrial 
 zma-u.5   103641737   uncharacterized LOC103641737 

close


Top 50 coexpressed genes to 101259109 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 101259109 (sly-u.5 coexpression data)

CoexMap"101259109"


slyLOC101259109 | Entrez gene ID : 101259109      
Species sly ath gma vvi mtr osa zma hvu bna cit bra ghi ppo sbi bdi nta tae cre sot
Paralog 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (280 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5687 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004250511.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  E.R. 2,  nucl 1,  mito 1,  E.R._vacu 1  (predict for XP_004250511.2)
Subcellular
localization
TargetP
mito 5  (predict for XP_004250511.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101259109
sly-r.6
for
101259109
ath-u.5
for
AT4G39952
gma-u.5
for
100780090
vvi-u.5
for
100242581
mtr-u.5
for
11437091
osa-u.5
for
112936052
zma-u.5
for
103641737


Ortholog ID: 11724
Species sly sot nta nta ath gma bra vvi mtr ghi ghi osa zma tae hvu bdi
Symbol LOC101259109 LOC102595011 LOC107793676 LOC107759490 AT4G39952 LOC100780090 LOC103853980 LOC100242581 LOC11437091 LOC107899825 LOC107911631 LOC112936052 LOC103641737 LOC123045691 LOC123426936 LOC100824044
Function* pentatricopeptide repeat-containing protein At4g39952, mitochondrial pentatricopeptide repeat-containing protein At4g39952, mitochondrial pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g39952, mitochondrial pentatricopeptide repeat-containing protein At4g39952, mitochondrial pentatricopeptide repeat-containing protein At4g39952, mitochondrial pentatricopeptide repeat-containing protein At4g39952, mitochondrial pentatricopeptide repeat-containing protein At4g39952, mitochondrial pentatricopeptide repeat-containing protein At4g39952, mitochondrial pentatricopeptide repeat-containing protein At4g39952, mitochondrial uncharacterized LOC103641737 F-box protein At5g39250 pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like pentatricopeptide repeat-containing protein At4g39952, mitochondrial
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101259109 102595011 107793676 107759490 830155 100780090 103853980 100242581 11437091 107899825 107911631 112936052 103641737 123045691 123426936 100824044
The preparation time of this page was 0.2 [sec].