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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107759490   pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like 
 sly-u.5   101259109   pentatricopeptide repeat-containing protein At4g39952, mitochondrial 
 ath-u.5   AT4G39952   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100780090   pentatricopeptide repeat-containing protein At4g39952, mitochondrial 
 vvi-u.5   100242581   pentatricopeptide repeat-containing protein At4g39952, mitochondrial 
 mtr-u.5   11437091   pentatricopeptide repeat-containing protein At4g39952, mitochondrial 
 osa-u.5   112936052   pentatricopeptide repeat-containing protein At4g39952, mitochondrial 
 zma-u.5   103641737   uncharacterized LOC103641737 

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Top 50 coexpressed genes to 107759490 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107759490 (nta-r.1 coexpression data)

CoexMap"107759490"


ntaLOC107759490 | Entrez gene ID : 107759490      
Species nta sly ath gma vvi mtr osa zma bdi hvu bra cit bna ppo sbi ghi sot cre tae
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (9561 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016432936.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  E.R. 3,  nucl 1,  mito 1,  E.R._plas 1,  cyto_E.R. 1  (predict for XP_016432936.2)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_016432936.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107759490
sly-u.5
for
101259109
ath-u.5
for
AT4G39952
gma-u.5
for
100780090
vvi-u.5
for
100242581
mtr-u.5
for
11437091
osa-u.5
for
112936052
zma-u.5
for
103641737


Ortholog ID: 11724
Species nta nta sly sot ath gma bra vvi mtr ghi ghi osa zma tae hvu bdi
Symbol LOC107793676 LOC107759490 LOC101259109 LOC102595011 AT4G39952 LOC100780090 LOC103853980 LOC100242581 LOC11437091 LOC107899825 LOC107911631 LOC112936052 LOC103641737 LOC123045691 LOC123426936 LOC100824044
Function* pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like pentatricopeptide repeat-containing protein At4g39952, mitochondrial pentatricopeptide repeat-containing protein At4g39952, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g39952, mitochondrial pentatricopeptide repeat-containing protein At4g39952, mitochondrial pentatricopeptide repeat-containing protein At4g39952, mitochondrial pentatricopeptide repeat-containing protein At4g39952, mitochondrial pentatricopeptide repeat-containing protein At4g39952, mitochondrial pentatricopeptide repeat-containing protein At4g39952, mitochondrial pentatricopeptide repeat-containing protein At4g39952, mitochondrial uncharacterized LOC103641737 F-box protein At5g39250 pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like pentatricopeptide repeat-containing protein At4g39952, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107793676 107759490 101259109 102595011 830155 100780090 103853980 100242581 11437091 107899825 107911631 112936052 103641737 123045691 123426936 100824044
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