ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101260597	pentatricopeptide repeat-containing protein At1g28690, mitochondrial
sly-r.6	101260597	pentatricopeptide repeat-containing protein At1g28690, mitochondrial
sot-r.1	102586623	pentatricopeptide repeat-containing protein At1g28690, mitochondrial
nta-r.1	107820659	pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like
nta-r.1	107768597	pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like
ath-u.5	AT1G28690	Tetratricopeptide repeat (TPR)-like superfamily protein
gma-u.5	100816489	pentatricopeptide repeat-containing protein At1g28690, mitochondrial
bra-r.6	103835305	pentatricopeptide repeat-containing protein At1g28690, mitochondrial
vvi-u.5	100261767	pentatricopeptide repeat-containing protein At1g28690, mitochondrial
mtr-u.5	11441288	pentatricopeptide repeat-containing protein At1g28690, mitochondrial
ghi-r.1	121217744	pentatricopeptide repeat-containing protein At1g28690, mitochondrial
ghi-r.1	107958421	pentatricopeptide repeat-containing protein At1g28690, mitochondrial
bna-r.1	106361666	pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like
cit-r.1	102619643	pentatricopeptide repeat-containing protein At1g28690, mitochondrial
zma-u.5	103654296	pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like
hvu-r.1	123401999	pentatricopeptide repeat-containing protein At1g28690, mitochondrial
sbi-r.1	8083029	pentatricopeptide repeat-containing protein At1g28690, mitochondrial
bdi-r.1	100846747	pentatricopeptide repeat-containing protein At1g28690, mitochondrial

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(280 genes)

IEA

GO CC

GO:0043231 [list] [network] intracellular membrane-bounded organelle

(5687 genes)

IEA

GO MF

GO:0003723 [list] [network] RNA binding	(1208 genes)	IEA
GO:0005515 [list] [network] protein binding	(3982 genes)	IEA

Protein

XP_010312638.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, chlo_mito 4, chlo 2, nucl 2, cyto 1

(predict for XP_010312638.1)

Subcellular
localization
TargetP

mito 4

(predict for XP_010312638.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101260597	sly-r.6 for 101260597	sot-r.1 for 102586623	nta-r.1 for 107820659	nta-r.1 for 107768597	ath-u.5 for AT1G28690	gma-u.5 for 100816489	bra-r.6 for 103835305	vvi-u.5 for 100261767	mtr-u.5 for 11441288	ghi-r.1 for 121217744	ghi-r.1 for 107958421	bna-r.1 for 106361666	cit-r.1 for 102619643	zma-u.5 for 103654296	hvu-r.1 for 123401999	sbi-r.1 for 8083029	bdi-r.1 for 100846747