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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1  8083029  pentatricopeptide repeat-containing protein At1g28690, mitochondrial 
 zma-u.5  103654296  pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like 
 ath-u.5  AT1G28690  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100816489  pentatricopeptide repeat-containing protein At1g28690, mitochondrial 
 sly-u.5  101260597  pentatricopeptide repeat-containing protein At1g28690, mitochondrial 
 vvi-u.5  100261767  pentatricopeptide repeat-containing protein At1g28690, mitochondrial 
 mtr-u.5  11441288  pentatricopeptide repeat-containing protein At1g28690, mitochondrial 

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Top 50 coexpressed genes to 8083029 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8083029 (sbi-r.1 coexpression data)

CoexMap"8083029"


sbiLOC8083029 | Entrez gene ID : 8083029
Species sbi zma ath gma sly vvi mtr bra nta osa cre cit hvu ppo bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002450172.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_002450172.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_002450172.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sbi-r.1
for
8083029

.

zma-u.5
for
103654296

.

ath-u.5
for
AT1G28690

.

gma-u.5
for
100816489

.

sly-u.5
for
101260597

.

vvi-u.5
for
100261767

.

mtr-u.5
for
11441288

.


Ortholog ID: 11489
Species ath gma sly zma bra vvi mtr hvu ghi ghi bna sbi sot cit bdi nta nta
Symbol AT1G28690 LOC100816489 LOC101260597 LOC103654296 LOC103835305 LOC100261767 LOC11441288 LOC123401999 LOC107958421 LOC121217744 LOC106361666 LOC8083029 LOC102586623 LOC102619643 LOC100846747 LOC107768597 LOC107820659
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839769 100816489 101260597 103654296 103835305 100261767 11441288 123401999 107958421 121217744 106361666 8083029 102586623 102619643 100846747 107768597 107820659
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