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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107768597   pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like 
 nta-r.1   107820659   pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like 
 sly-u.5   101260597   pentatricopeptide repeat-containing protein At1g28690, mitochondrial 
 sot-r.1   102586623   pentatricopeptide repeat-containing protein At1g28690, mitochondrial 
 ath-u.5   AT1G28690   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100816489   pentatricopeptide repeat-containing protein At1g28690, mitochondrial 
 bra-r.6   103835305   pentatricopeptide repeat-containing protein At1g28690, mitochondrial 
 vvi-u.5   100261767   pentatricopeptide repeat-containing protein At1g28690, mitochondrial 
 mtr-u.5   11441288   pentatricopeptide repeat-containing protein At1g28690, mitochondrial 
 ghi-r.1   107958421   pentatricopeptide repeat-containing protein At1g28690, mitochondrial 
 ghi-r.1   121217744   pentatricopeptide repeat-containing protein At1g28690, mitochondrial 
 bna-r.1   106361666   pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like 
 cit-r.1   102619643   pentatricopeptide repeat-containing protein At1g28690, mitochondrial 
 zma-u.5   103654296   pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like 
 hvu-r.1   123401999   pentatricopeptide repeat-containing protein At1g28690, mitochondrial 
 sbi-r.1   8083029   pentatricopeptide repeat-containing protein At1g28690, mitochondrial 
 bdi-r.1   100846747   pentatricopeptide repeat-containing protein At1g28690, mitochondrial 

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Top 50 coexpressed genes to 107768597 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107768597 (nta-r.1 coexpression data)

CoexMap"107768597"


ntaLOC107768597 | Entrez gene ID : 107768597    
Species nta sly sot ath gma bra vvi mtr ghi bna cit zma hvu sbi bdi ppo cre osa tae
Paralog 2 1 1 1 1 1 1 1 2 1 1 1 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_075080847.1 [sequence] [blastp]
XP_075080848.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  mito 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_075080847.1)
cyto 4,  nucl 3,  mito 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_075080848.1)
Subcellular
localization
TargetP
other 8  (predict for XP_075080847.1)
other 8  (predict for XP_075080848.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107768597
nta-r.1
for
107820659
sly-u.5
for
101260597
sot-r.1
for
102586623
ath-u.5
for
AT1G28690
gma-u.5
for
100816489
bra-r.6
for
103835305
vvi-u.5
for
100261767
mtr-u.5
for
11441288
ghi-r.1
for
107958421
ghi-r.1
for
121217744
bna-r.1
for
106361666
cit-r.1
for
102619643
zma-u.5
for
103654296
hvu-r.1
for
123401999
sbi-r.1
for
8083029
bdi-r.1
for
100846747


Ortholog ID: 11489
Species nta nta sly sot ath gma bra vvi mtr ghi ghi bna cit zma hvu sbi bdi
Symbol LOC107768597 LOC107820659 LOC101260597 LOC102586623 AT1G28690 LOC100816489 LOC103835305 LOC100261767 LOC11441288 LOC107958421 LOC121217744 LOC106361666 LOC102619643 LOC103654296 LOC123401999 LOC8083029 LOC100846747
Function* pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial pentatricopeptide repeat-containing protein At1g28690, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107768597 107820659 101260597 102586623 839769 100816489 103835305 100261767 11441288 107958421 121217744 106361666 102619643 103654296 123401999 8083029 100846747
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