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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101261864   growth-regulating factor 3 
 sly-r.6   101261864   growth-regulating factor 3 
 sly-u.5   101268132   growth-regulating factor 3-like 
 sot-r.1   107059479   growth-regulating factor 3-like 
 sot-r.1   102596708   growth-regulating factor 3-like 
 sot-r.1   102584006   growth-regulating factor 3-like 
 nta-r.1   107813130   growth-regulating factor 3 
 nta-r.1   107799814   growth-regulating factor 3-like 
 ath-u.5   GRF3   growth-regulating factor 3 
 ath-u.5   GRF4   growth-regulating factor 4 
 gma-u.5   GRF12   growth-regulating factor 
 gma-u.5   GRF3   growth-regulating factor 3 
 gma-u.5   GRF20   growth-regulating factor 
 bra-r.6   103865541   growth-regulating factor 3 
 bra-r.6   103867286   growth-regulating factor 3 
 vvi-u.5   100249368   growth-regulating factor 3 
 ppo-u.5   18100062   growth-regulating factor 4 
 mtr-u.5   11429911   growth-regulating factor 3 
 ghi-r.1   107948453   growth-regulating factor 3 
 ghi-r.1   107908708   growth-regulating factor 3 
 ghi-r.1   107889558   growth-regulating factor 3 
 bna-r.1   125609293   growth-regulating factor 3-like 
 bna-r.1   125608315   growth-regulating factor 3-like 
 cit-r.1   102615240   growth-regulating factor 3 

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Top 50 coexpressed genes to 101261864 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101261864 (sly-u.5 coexpression data)

CoexMap"101261864"


slyLOC101261864 | Entrez gene ID : 101261864      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa bdi tae zma sbi hvu cre
Paralog 3 3 2 2 3 2 1 1 1 3 2 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (217 genes)  IEA  
GO:0032502 [list] [network] developmental process  (354 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1608 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (1916 genes)  IEA  
Protein XP_004249453.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_004249453.2)
Subcellular
localization
TargetP
other 8  (predict for XP_004249453.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101261864
sly-r.6
for
101261864
sly-u.5
for
101268132
sot-r.1
for
107059479
sot-r.1
for
102596708
sot-r.1
for
102584006
nta-r.1
for
107813130
nta-r.1
for
107799814
ath-u.5
for
GRF3
ath-u.5
for
GRF4
gma-u.5
for
GRF12
gma-u.5
for
GRF3
gma-u.5
for
GRF20
bra-r.6
for
103865541
bra-r.6
for
103867286
vvi-u.5
for
100249368
ppo-u.5
for
18100062
mtr-u.5
for
11429911
ghi-r.1
for
107948453
ghi-r.1
for
107908708
ghi-r.1
for
107889558
bna-r.1
for
125609293
bna-r.1
for
125608315
cit-r.1
for
102615240


Ortholog ID: 4531
Species sly sly sot sot sot nta nta nta ath ath gma gma gma bra vvi ppo mtr ghi ghi ghi bna bna cit
Symbol LOC101261864 LOC101268132 LOC107059479 LOC102596708 LOC102584006 LOC107813130 LOC107799814 LOC107770693 GRF3 GRF4 GRF12 GRF3 GRF9 LOC103867286 LOC100249368 LOC18100062 LOC11429911 LOC107908708 LOC107889558 LOC107948122 LOC125609293 LOC106367805 LOC102615240
Function* growth-regulating factor 3 growth-regulating factor 3-like growth-regulating factor 3-like growth-regulating factor 3-like growth-regulating factor 3-like growth-regulating factor 3 growth-regulating factor 3-like growth-regulating factor 3-like growth-regulating factor 3 growth-regulating factor 4 growth-regulating factor growth-regulating factor 3 growth-regulating factor growth-regulating factor 3 growth-regulating factor 3 growth-regulating factor 4 growth-regulating factor 3 growth-regulating factor 3 growth-regulating factor 3 growth-regulating factor 3-like growth-regulating factor 3-like growth-regulating factor 4 growth-regulating factor 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 12
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101261864 101268132 107059479 102596708 102584006 107813130 107799814 107770693 818213 824457 100817197 100816436 100814300 103867286 100249368 18100062 11429911 107908708 107889558 107948122 125609293 106367805 102615240
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