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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107948453   growth-regulating factor 3 
 ghi-r.1   107908708   growth-regulating factor 3 
 ghi-r.1   107889558   growth-regulating factor 3 
 ghi-r.1   107948122   growth-regulating factor 3-like 
 ath-u.5   GRF3   growth-regulating factor 3 
 ath-u.5   GRF4   growth-regulating factor 4 
 bra-r.6   103867286   growth-regulating factor 3 
 bra-r.6   103865541   growth-regulating factor 3 
 bra-r.6   103857622   growth-regulating factor 3 
 bna-r.1   125609293   growth-regulating factor 3-like 
 bna-r.1   125608315   growth-regulating factor 3-like 
 cit-r.1   102615240   growth-regulating factor 3 
 gma-u.5   GRF12   growth-regulating factor 
 gma-u.5   GRF9   growth-regulating factor 
 gma-u.5   GRF20   growth-regulating factor 
 vvi-u.5   100249368   growth-regulating factor 3 
 ppo-u.5   18100062   growth-regulating factor 4 
 mtr-u.5   11429911   growth-regulating factor 3 
 sly-u.5   101268132   growth-regulating factor 3-like 
 sly-u.5   101261864   growth-regulating factor 3 
 sot-r.1   102584006   growth-regulating factor 3-like 
 sot-r.1   102596708   growth-regulating factor 3-like 
 sot-r.1   107059479   growth-regulating factor 3-like 
 nta-r.1   107799814   growth-regulating factor 3-like 
 nta-r.1   107770693   growth-regulating factor 3-like 

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Top 50 coexpressed genes to 107948453 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107948453 (ghi-r.1 coexpression data)

CoexMap"107948453"


ghiLOC107948453 | Entrez gene ID : 107948453    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta zma cre sbi tae osa hvu bdi
Paralog 4 2 3 2 1 3 1 1 1 2 3 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (617 genes)  IEA  
GO:0032502 [list] [network] developmental process  (1029 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_040947346.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_040947346.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for XP_040947346.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107948453
ghi-r.1
for
107908708
ghi-r.1
for
107889558
ghi-r.1
for
107948122
ath-u.5
for
GRF3
ath-u.5
for
GRF4
bra-r.6
for
103867286
bra-r.6
for
103865541
bra-r.6
for
103857622
bna-r.1
for
125609293
bna-r.1
for
125608315
cit-r.1
for
102615240
gma-u.5
for
GRF12
gma-u.5
for
GRF9
gma-u.5
for
GRF20
vvi-u.5
for
100249368
ppo-u.5
for
18100062
mtr-u.5
for
11429911
sly-u.5
for
101268132
sly-u.5
for
101261864
sot-r.1
for
102584006
sot-r.1
for
102596708
sot-r.1
for
107059479
nta-r.1
for
107799814
nta-r.1
for
107770693


Ortholog ID: 4531
Species ghi ghi ghi ath ath bra bna bna cit gma gma gma vvi ppo mtr sly sly sot sot sot nta nta nta
Symbol LOC107908708 LOC107889558 LOC107948122 GRF3 GRF4 LOC103867286 LOC125609293 LOC106367805 LOC102615240 GRF12 GRF9 GRF3 LOC100249368 LOC18100062 LOC11429911 LOC101268132 LOC101261864 LOC102584006 LOC102596708 LOC107059479 LOC107799814 LOC107770693 LOC107813130
Function* growth-regulating factor 3 growth-regulating factor 3 growth-regulating factor 3-like growth-regulating factor 3 growth-regulating factor 4 growth-regulating factor 3 growth-regulating factor 3-like growth-regulating factor 4 growth-regulating factor 3 growth-regulating factor growth-regulating factor growth-regulating factor 3 growth-regulating factor 3 growth-regulating factor 4 growth-regulating factor 3 growth-regulating factor 3-like growth-regulating factor 3 growth-regulating factor 3-like growth-regulating factor 3-like growth-regulating factor 3-like growth-regulating factor 3-like growth-regulating factor 3-like growth-regulating factor 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 12
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107908708 107889558 107948122 818213 824457 103867286 125609293 106367805 102615240 100817197 100814300 100816436 100249368 18100062 11429911 101268132 101261864 102584006 102596708 107059479 107799814 107770693 107813130
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