ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101262246	uncharacterized LOC101262246
sly-r.6	101262246	uncharacterized LOC101262246
sly-u.5	101254928	uncharacterized LOC101254928
ath-u.5	AT4G17140	pleckstrin homology (PH) domain-containing protein
ath-u.5	AT1G48090	calcium-dependent lipid-binding family protein
gma-u.5	100782481	uncharacterized LOC100782481
gma-u.5	100780088	uncharacterized LOC100780088
vvi-u.5	100258011	uncharacterized LOC100258011
vvi-u.5	100260794	uncharacterized LOC100260794
ppo-u.5	7475694	uncharacterized LOC7475694
ppo-u.5	7498234	uncharacterized LOC7498234
mtr-u.5	25494140	uncharacterized LOC25494140
mtr-u.5	11426962	uncharacterized LOC11426962
osa-u.5	4329342	uncharacterized LOC4329342
osa-u.5	4349418	uncharacterized LOC4349418
zma-u.5	103654673	uncharacterized LOC103654673
zma-u.5	103638912	uncharacterized LOC103638912

Top 50 coexpressed genes to 101262246 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101262246 (sly-u.5 coexpression data)

CoexMap"101262246"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0016020 [list] [network] membrane

(3085 genes)

IEA

GO MF

Protein

XP_010325928.1 [sequence] [blastp]
XP_019071183.1 [sequence] [blastp]
XP_025888724.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 9, nucl 1, E.R. 1	(predict for XP_010325928.1)
plas 9, E.R. 1	(predict for XP_019071183.1)
plas 7, E.R. 1, nucl 1, pero 1, E.R._vacu 1, cyto_E.R. 1	(predict for XP_025888724.1)

Subcellular
localization
TargetP

other 4, mito 3	(predict for XP_010325928.1)
other 5	(predict for XP_019071183.1)
other 7, mito 3	(predict for XP_025888724.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101262246	sly-r.6 for 101262246	sly-u.5 for 101254928	ath-u.5 for AT4G17140	ath-u.5 for AT1G48090	gma-u.5 for 100782481	gma-u.5 for 100780088	vvi-u.5 for 100258011	vvi-u.5 for 100260794	ppo-u.5 for 7475694	ppo-u.5 for 7498234	mtr-u.5 for 25494140	mtr-u.5 for 11426962	osa-u.5 for 4329342	osa-u.5 for 4349418	zma-u.5 for 103654673	zma-u.5 for 103638912

Ortholog

Ortholog ID: 2487

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC101254928

uncharacterized LOC101262246

uncharacterized LOC102583893

uncharacterized LOC102586877

uncharacterized LOC107798809

uncharacterized LOC107795012

calcium-dependent lipid-binding family protein

pleckstrin homology (PH) domain-containing protein

uncharacterized LOC100780088

uncharacterized LOC100782481

uncharacterized LOC103871499

uncharacterized LOC100260794

uncharacterized LOC100258011

uncharacterized LOC7475694

uncharacterized LOC7498234

uncharacterized LOC25494140

uncharacterized LOC11426962

uncharacterized LOC107896585

uncharacterized LOC107933727

uncharacterized LOC106444897

uncharacterized LOC106360702

uncharacterized LOC102625672

uncharacterized LOC102618522

uncharacterized LOC4329342

uncharacterized LOC4349418

uncharacterized LOC103654673

uncharacterized LOC103638912

uncharacterized LOC123052093

uncharacterized LOC123181645

uncharacterized LOC123439026

uncharacterized LOC123406267

uncharacterized LOC8056654

uncharacterized LOC8058057

uncharacterized LOC100839715

uncharacterized LOC104584266

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	2
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	2
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2
ath03082	ATP-dependent chromatin remodeling	2
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	4
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	4
bra03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	2
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	2
vvi04120	Ubiquitin mediated proteolysis	2
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	5
mtr03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	4
bna03015	mRNA surveillance pathway	2
bna03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	2
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	2
tae04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04142	Lysosome	2
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	3
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2
bdi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04814	Motor proteins	6

Expression

Expression pattern

Entrez Gene ID^*

101254928

101262246

102583893

102586877

107798809

107795012

841226

827424

100780088

100782481

103871499

100260794

100258011

7475694

7498234

25494140

11426962

107896585

107933727

106444897

106360702

102625672

102618522

4329342

4349418

103654673

103638912

123052093

123181645

123439026

123406267

8056654

8058057

100839715

104584266

5722820

5728745

The preparation time of this page was 0.1 [sec].


Species	sly	ath	gma	vvi	ppo	mtr	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	2	2	2	2	2	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101262246 (sly-u.5 coexpression data)

Top 50 enrichment test to 101262246 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**