ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123144534	uncharacterized LOC123144534
tae-r.2	123127457	uncharacterized LOC123127457
tae-r.2	123181645	uncharacterized LOC123181645
tae-r.2	123052093	uncharacterized LOC123052093
hvu-r.1	123439026	uncharacterized LOC123439026
hvu-r.1	123406267	uncharacterized LOC123406267
bdi-r.1	100839715	uncharacterized LOC100839715
bdi-r.1	104584266	uncharacterized LOC104584266
bdi-r.1	100837501	uncharacterized LOC100837501
osa-u.5	4349418	uncharacterized LOC4349418
osa-u.5	4329342	uncharacterized LOC4329342
zma-u.5	103638912	uncharacterized LOC103638912
zma-u.5	103654673	uncharacterized LOC103654673
sbi-r.1	8058057	uncharacterized LOC8058057
sbi-r.1	8056654	uncharacterized LOC8056654
ath-u.5	AT4G17140	pleckstrin homology (PH) domain-containing protein
ath-u.5	AT1G48090	calcium-dependent lipid-binding family protein
gma-u.5	100780088	uncharacterized LOC100780088
gma-u.5	100782481	uncharacterized LOC100782481
sly-u.5	101262246	uncharacterized LOC101262246
sly-u.5	101254928	uncharacterized LOC101254928
bra-r.6	103871499	uncharacterized LOC103871499
bra-r.6	103833994	uncharacterized LOC103833994
bra-r.6	103833252	uncharacterized LOC103833252
vvi-u.5	100258011	uncharacterized LOC100258011
vvi-u.5	100260794	uncharacterized LOC100260794
ppo-u.5	7498234	uncharacterized LOC7498234
ppo-u.5	7475694	uncharacterized LOC7475694
mtr-u.5	25494140	uncharacterized LOC25494140
mtr-u.5	11426962	uncharacterized LOC11426962
ghi-r.1	107896585	uncharacterized LOC107896585
ghi-r.1	107910550	uncharacterized LOC107910550
ghi-r.1	107919490	uncharacterized LOC107919490
bna-r.1	106425218	uncharacterized LOC106425218
bna-r.1	111211994	uncharacterized LOC111211994
bna-r.1	106444897	uncharacterized LOC106444897
sot-r.1	102586877	uncharacterized LOC102586877
sot-r.1	102583893	uncharacterized LOC102583893
cit-r.1	102625672	uncharacterized LOC102625672
cit-r.1	102618522	uncharacterized LOC102618522
nta-r.1	107782497	uncharacterized LOC107782497
nta-r.1	107790661	uncharacterized LOC107790661
nta-r.1	107795012	uncharacterized LOC107795012
cre-r.1	CHLRE_12g483500v5	uncharacterized protein
cre-r.1	CHLRE_17g728250v5	uncharacterized protein

Top 50 coexpressed genes to 123144534 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123144534 (tae-r.2 coexpression data)

CoexMap"123144534"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0016020 [list] [network] membrane

(10843 genes)

IEA

GO MF

Protein

XP_044419667.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, plas 3, chlo 1, cyto 1, golg_plas 1, cysk_plas 1, E.R._plas 1, mito_plas 1

(predict for XP_044419667.1)

Subcellular
localization
TargetP

other 7, scret 3

(predict for XP_044419667.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123144534	tae-r.2 for 123127457	tae-r.2 for 123181645	tae-r.2 for 123052093	hvu-r.1 for 123439026	hvu-r.1 for 123406267	bdi-r.1 for 100839715	bdi-r.1 for 104584266	bdi-r.1 for 100837501	osa-u.5 for 4349418	osa-u.5 for 4329342	zma-u.5 for 103638912	zma-u.5 for 103654673	sbi-r.1 for 8058057	sbi-r.1 for 8056654	ath-u.5 for AT4G17140	ath-u.5 for AT1G48090	gma-u.5 for 100780088	gma-u.5 for 100782481	sly-u.5 for 101262246	sly-u.5 for 101254928	bra-r.6 for 103871499	bra-r.6 for 103833994	bra-r.6 for 103833252	vvi-u.5 for 100258011	vvi-u.5 for 100260794	ppo-u.5 for 7498234	ppo-u.5 for 7475694	mtr-u.5 for 25494140	mtr-u.5 for 11426962	ghi-r.1 for 107896585	ghi-r.1 for 107910550	ghi-r.1 for 107919490	bna-r.1 for 106425218	bna-r.1 for 111211994	bna-r.1 for 106444897	sot-r.1 for 102586877	sot-r.1 for 102583893	cit-r.1 for 102625672	cit-r.1 for 102618522	nta-r.1 for 107782497	nta-r.1 for 107790661	nta-r.1 for 107795012	cre-r.1 for CHLRE_12g483500v5	cre-r.1 for CHLRE_17g728250v5

Ortholog

Ortholog ID: 2487

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC123144534

uncharacterized LOC123181645

uncharacterized LOC123052093

uncharacterized LOC123439026

uncharacterized LOC123406267

uncharacterized LOC100839715

uncharacterized LOC104584266

uncharacterized LOC100837501

uncharacterized LOC4349418

uncharacterized LOC4329342

uncharacterized LOC103638912

uncharacterized LOC103654673

uncharacterized LOC8058057

uncharacterized LOC8056654

pleckstrin homology (PH) domain-containing protein

calcium-dependent lipid-binding family protein

uncharacterized LOC100780088

uncharacterized LOC100782481

uncharacterized LOC101262246

uncharacterized LOC101254928

uncharacterized LOC103871499

uncharacterized LOC103833994

uncharacterized LOC100258011

uncharacterized LOC100260794

uncharacterized LOC7498234

uncharacterized LOC7475694

uncharacterized LOC25494140

uncharacterized LOC11426962

uncharacterized LOC107896585

uncharacterized LOC107933727

uncharacterized LOC107886399

uncharacterized LOC106444897

uncharacterized LOC106360702

intermembrane lipid transfer protein vps13A-like

uncharacterized LOC102586877

uncharacterized LOC102583893

uncharacterized LOC102625672

uncharacterized LOC102618522

uncharacterized LOC107790661

uncharacterized LOC107795012

uncharacterized LOC107798809

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04148	Efferocytosis	3
tae03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	2
tae04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2
bdi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	2
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	3
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04142	Lysosome	2
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2
ath03082	ATP-dependent chromatin remodeling	2
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	4
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	2
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	2
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	4
bra03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3
bra03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	2
vvi04120	Ubiquitin mediated proteolysis	2
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	2
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	5
mtr03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	4
bna03015	mRNA surveillance pathway	2
bna03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04814	Motor proteins	6

Expression

Expression pattern

Entrez Gene ID^*

123144534

123181645

123052093

123439026

123406267

100839715

104584266

100837501

4349418

4329342

103638912

103654673

8058057

8056654

827424

841226

100780088

100782481

101262246

101254928

103871499

103833994

100258011

100260794

7498234

7475694

25494140

11426962

107896585

107933727

107886399

106444897

106360702

106433153

102586877

102583893

102625672

102618522

107790661

107795012

107798809

5728745

5722820

The preparation time of this page was 0.2 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	3	2	2	2	2	2	2	3	2	2	2	3	3	2	2	3	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123144534 (tae-r.2 coexpression data)

Top 50 enrichment test to 123144534 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**