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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101262604   pentatricopeptide repeat-containing protein At4g38150 
 sly-r.6   101262604   pentatricopeptide repeat-containing protein At4g38150 
 ath-u.5   AT4G38150   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100812887   pentatricopeptide repeat-containing protein At4g38150 
 gma-u.5   100780355   pentatricopeptide repeat-containing protein At4g38150 
 vvi-u.5   100252103   pentatricopeptide repeat-containing protein At4g38150 
 ppo-u.5   18098182   pentatricopeptide repeat-containing protein At4g38150 
 mtr-u.5   25502059   pentatricopeptide repeat-containing protein At4g38150 
 mtr-u.5   11407519   pentatricopeptide repeat-containing protein At4g38150 
 osa-u.5   4326881   pentatricopeptide repeat-containing protein At4g38150 
 zma-u.5   100501704   uncharacterized LOC100501704 

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Top 50 coexpressed genes to 101262604 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101262604 (sly-u.5 coexpression data)

CoexMap"101262604"


slyLOC101262604 | Entrez gene ID : 101262604      
Species sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 2 1 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004253081.1 [sequence] [blastp]
XP_025884399.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  nucl 2  (predict for XP_004253081.1)
chlo 4,  mito 4,  nucl 2  (predict for XP_025884399.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_004253081.1)
mito 8  (predict for XP_025884399.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101262604
sly-r.6
for
101262604
ath-u.5
for
AT4G38150
gma-u.5
for
100812887
gma-u.5
for
100780355
vvi-u.5
for
100252103
ppo-u.5
for
18098182
mtr-u.5
for
25502059
mtr-u.5
for
11407519
osa-u.5
for
4326881
zma-u.5
for
100501704


Ortholog ID: 9629
Species sly sot nta nta ath gma gma bra vvi ppo mtr mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC101262604 LOC102590270 LOC107807786 LOC142169906 AT4G38150 LOC100780355 LOC100812887 LOC103827676 LOC100252103 LOC18098182 LOC25502059 LOC11407519 LOC107919824 LOC107894013 LOC106406987 LOC106400615 LOC102627297 LOC4326881 LOC100501704 LOC123061275 LOC123069808 LOC123443731 LOC8074993 LOC100822957
Function* pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 uncharacterized LOC107807786 uncharacterized LOC142169906 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150-like pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 uncharacterized LOC100501704 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150-like pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 5
tae00790 Folate biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101262604 102590270 107807786 142169906 829971 100780355 100812887 103827676 100252103 18098182 25502059 11407519 107919824 107894013 106406987 106400615 102627297 4326881 100501704 123061275 123069808 123443731 8074993 100822957
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