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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107807786   uncharacterized LOC107807786 
 nta-r.1   107827082   uncharacterized LOC107827082 
 nta-r.1   142169906   uncharacterized LOC142169906 
 sly-u.5   101262604   pentatricopeptide repeat-containing protein At4g38150 
 sot-r.1   102590270   pentatricopeptide repeat-containing protein At4g38150 
 ath-u.5   AT4G38150   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100812887   pentatricopeptide repeat-containing protein At4g38150 
 gma-u.5   100780355   pentatricopeptide repeat-containing protein At4g38150 
 bra-r.6   103827676   pentatricopeptide repeat-containing protein At4g38150 
 vvi-u.5   100252103   pentatricopeptide repeat-containing protein At4g38150 
 ppo-u.5   18098182   pentatricopeptide repeat-containing protein At4g38150 
 mtr-u.5   11407519   pentatricopeptide repeat-containing protein At4g38150 
 mtr-u.5   25502059   pentatricopeptide repeat-containing protein At4g38150 
 ghi-r.1   107894013   pentatricopeptide repeat-containing protein At4g38150 
 ghi-r.1   107919824   pentatricopeptide repeat-containing protein At4g38150 
 bna-r.1   106406987   pentatricopeptide repeat-containing protein At4g38150 
 bna-r.1   106400615   pentatricopeptide repeat-containing protein At4g38150-like 
 cit-r.1   102627297   pentatricopeptide repeat-containing protein At4g38150 
 osa-u.5   4326881   pentatricopeptide repeat-containing protein At4g38150 
 zma-u.5   100501704   uncharacterized LOC100501704 
 tae-r.2   123061275   pentatricopeptide repeat-containing protein At4g38150 
 tae-r.2   123069808   pentatricopeptide repeat-containing protein At4g38150 
 hvu-r.1   123443731   pentatricopeptide repeat-containing protein At4g38150-like 
 sbi-r.1   8074993   pentatricopeptide repeat-containing protein At4g38150 
 bdi-r.1   100822957   pentatricopeptide repeat-containing protein At4g38150 

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Top 50 coexpressed genes to 107807786 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107807786 (nta-r.1 coexpression data)

CoexMap"107807786"


ntaLOC107807786 | Entrez gene ID : 107807786    
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 2 1 1 1 2 2 2 1 1 1 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016487710.1 [sequence] [blastp]
XP_016487711.1 [sequence] [blastp]
XP_075095957.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_016487710.1)
chlo 6,  mito 3,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_016487711.1)
chlo 4,  mito 3,  nucl 2  (predict for XP_075095957.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_016487710.1)
mito 7  (predict for XP_016487711.1)
mito 7  (predict for XP_075095957.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107807786
nta-r.1
for
107827082
nta-r.1
for
142169906
sly-u.5
for
101262604
sot-r.1
for
102590270
ath-u.5
for
AT4G38150
gma-u.5
for
100812887
gma-u.5
for
100780355
bra-r.6
for
103827676
vvi-u.5
for
100252103
ppo-u.5
for
18098182
mtr-u.5
for
11407519
mtr-u.5
for
25502059
ghi-r.1
for
107894013
ghi-r.1
for
107919824
bna-r.1
for
106406987
bna-r.1
for
106400615
cit-r.1
for
102627297
osa-u.5
for
4326881
zma-u.5
for
100501704
tae-r.2
for
123061275
tae-r.2
for
123069808
hvu-r.1
for
123443731
sbi-r.1
for
8074993
bdi-r.1
for
100822957


Ortholog ID: 9629
Species nta nta nta sly sot ath gma gma bra vvi ppo mtr mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC107807786 LOC107827082 LOC142169906 LOC101262604 LOC102590270 AT4G38150 LOC100812887 LOC100780355 LOC103827676 LOC100252103 LOC18098182 LOC11407519 LOC25502059 LOC107894013 LOC107919824 LOC106406987 LOC106400615 LOC102627297 LOC4326881 LOC100501704 LOC123061275 LOC123069808 LOC123443731 LOC8074993 LOC100822957
Function* uncharacterized LOC107807786 uncharacterized LOC107827082 uncharacterized LOC142169906 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150-like pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 uncharacterized LOC100501704 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150-like pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 5
tae00790 Folate biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107807786 107827082 142169906 101262604 102590270 829971 100812887 100780355 103827676 100252103 18098182 11407519 25502059 107894013 107919824 106406987 106400615 102627297 4326881 100501704 123061275 123069808 123443731 8074993 100822957
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