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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8074993   pentatricopeptide repeat-containing protein At4g38150 
 zma-u.5   100501704   uncharacterized LOC100501704 
 osa-u.5   4326881   pentatricopeptide repeat-containing protein At4g38150 
 ath-u.5   AT4G38150   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100812887   pentatricopeptide repeat-containing protein At4g38150 
 gma-u.5   100780355   pentatricopeptide repeat-containing protein At4g38150 
 sly-u.5   101262604   pentatricopeptide repeat-containing protein At4g38150 
 vvi-u.5   100252103   pentatricopeptide repeat-containing protein At4g38150 
 ppo-u.5   18098182   pentatricopeptide repeat-containing protein At4g38150 
 mtr-u.5   11407519   pentatricopeptide repeat-containing protein At4g38150 
 mtr-u.5   25502059   pentatricopeptide repeat-containing protein At4g38150 

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Top 50 coexpressed genes to 8074993 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8074993 (sbi-r.1 coexpression data)

CoexMap"8074993"


sbiLOC8074993 | Entrez gene ID : 8074993      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002457984.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_002457984.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_002457984.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8074993

.
zma-u.5
for
100501704

.
osa-u.5
for
4326881

.
ath-u.5
for
AT4G38150

.
gma-u.5
for
100812887

.
gma-u.5
for
100780355

.
sly-u.5
for
101262604

.
vvi-u.5
for
100252103

.
ppo-u.5
for
18098182

.
mtr-u.5
for
11407519

.
mtr-u.5
for
25502059

.


Ortholog ID: 9629
Species ath gma gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT4G38150 LOC100780355 LOC100812887 LOC101262604 LOC4326881 LOC100501704 LOC103827676 LOC100252103 LOC18098182 LOC25502059 LOC11407519 LOC123061275 LOC123069808 LOC123443731 LOC107919824 LOC107894013 LOC106406987 LOC106400615 LOC8074993 LOC102590270 LOC102627297 LOC100822957 LOC107807786 LOC142169906
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 uncharacterized LOC100501704 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150-like pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150-like pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 pentatricopeptide repeat-containing protein At4g38150 uncharacterized LOC107807786 uncharacterized LOC142169906
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 5
tae00790 Folate biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829971 100780355 100812887 101262604 4326881 100501704 103827676 100252103 18098182 25502059 11407519 123061275 123069808 123443731 107919824 107894013 106406987 106400615 8074993 102590270 102627297 100822957 107807786 142169906
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