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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101263813   vacuolar protein-sorting-associated protein 33 homolog 
 sly-r.6   101263813   vacuolar protein-sorting-associated protein 33 homolog 
 sot-r.1   102599355   vacuolar protein-sorting-associated protein 33 homolog 
 nta-r.1   107822287   vacuolar protein-sorting-associated protein 33 homolog 
 nta-r.1   107798867   vacuolar protein-sorting-associated protein 33 homolog 
 ath-u.5   ATVPS33   Sec1/munc18-like (SM) proteins superfamily 
 gma-u.5   100808578   vacuolar protein-sorting-associated protein 33 homolog 
 bra-r.6   103841389   vacuolar protein-sorting-associated protein 33 homolog 
 vvi-u.5   100242749   vacuolar protein-sorting-associated protein 33 homolog 
 ppo-u.5   7479860   vacuolar protein-sorting-associated protein 33 homolog 
 ppo-u.5   7468434   vacuolar protein-sorting-associated protein 33 homolog 
 mtr-u.5   25484929   vacuolar protein-sorting-associated protein 33 homolog 
 ghi-r.1   121229720   vacuolar protein-sorting-associated protein 33 homolog 
 ghi-r.1   107904278   vacuolar protein-sorting-associated protein 33 homolog 
 bna-r.1   106415228   vacuolar protein-sorting-associated protein 33 homolog 
 cit-r.1   102620292   vacuolar protein-sorting-associated protein 33 homolog 
 osa-u.5   4335201   vacuolar protein-sorting-associated protein 33 homolog 
 zma-u.5   100282554   uncharacterized LOC100282554 
 tae-r.2   123147670   vacuolar protein-sorting-associated protein 33 homolog 
 tae-r.2   123169381   vacuolar protein-sorting-associated protein 33 homolog 
 tae-r.2   123145878   vacuolar protein-sorting-associated protein 33 homolog 
 hvu-r.1   123424488   vacuolar protein-sorting-associated protein 33 homolog 
 sbi-r.1   8078604   vacuolar protein-sorting-associated protein 33 homolog 
 bdi-r.1   100837006   vacuolar protein-sorting-associated protein 33 homolog 
 cre-r.1   CHLRE_12g515550v5   uncharacterized protein 

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Top 50 coexpressed genes to 101263813 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101263813 (sly-u.5 coexpression data)

CoexMap"101263813"


slyLOC101263813 | Entrez gene ID : 101263813      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 1 1 1 2 1 2 1 1 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04148 [list] [network] Efferocytosis (57 genes)
GO BP
GO:0006886 [list] [network] intracellular protein transport  (272 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (469 genes)  IEA  
GO CC
GO:0033263 [list] [network] CORVET complex  (1 genes)  IEA  
GO:0005773 [list] [network] vacuole  (225 genes)  IEA  
GO MF
Protein XP_004239704.1 [sequence] [blastp]
XP_010321334.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_plas 2,  vacu 1,  E.R. 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_004239704.1)
cyto 4,  nucl 2,  cyto_plas 2,  vacu 1,  E.R. 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_010321334.1)
Subcellular
localization
TargetP
other 8  (predict for XP_004239704.1)
other 8  (predict for XP_010321334.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101263813
sly-r.6
for
101263813
sot-r.1
for
102599355
nta-r.1
for
107822287
nta-r.1
for
107798867
ath-u.5
for
ATVPS33
gma-u.5
for
100808578
bra-r.6
for
103841389
vvi-u.5
for
100242749
ppo-u.5
for
7479860
ppo-u.5
for
7468434
mtr-u.5
for
25484929
ghi-r.1
for
121229720
ghi-r.1
for
107904278
bna-r.1
for
106415228
cit-r.1
for
102620292
osa-u.5
for
4335201
zma-u.5
for
100282554
tae-r.2
for
123147670
tae-r.2
for
123169381
tae-r.2
for
123145878
hvu-r.1
for
123424488
sbi-r.1
for
8078604
bdi-r.1
for
100837006
cre-r.1
for
CHLRE_12g515550v5


Ortholog ID: 9540
Species sly sot nta nta ath gma bra vvi ppo ppo mtr ghi ghi bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC101263813 LOC102599355 LOC107822287 LOC107798867 ATVPS33 LOC100808578 LOC103841389 LOC100242749 LOC7479860 LOC7468434 LOC25484929 LOC121229720 LOC107904278 LOC106415228 LOC102620292 LOC4335201 LOC100282554 LOC123147670 LOC123169381 LOC123145878 LOC123424488 LOC8078604 LOC100837006 CHLRE_12g515550v5
Function* vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog Sec1/munc18-like (SM) proteins superfamily vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog uncharacterized LOC100282554 vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta04144 Endocytosis 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 4
ath04148 Efferocytosis 3
ath00190 Oxidative phosphorylation 2
ath04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
gma00010 Glycolysis / Gluconeogenesis 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 9
bra04145 Phagosome 9
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
ppo00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
mtr04120 Ubiquitin mediated proteolysis 3
mtr03013 Nucleocytoplasmic transport 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
ghi04148 Efferocytosis 2
ghi00062 Fatty acid elongation 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
ghi04148 Efferocytosis 2
ghi00062 Fatty acid elongation 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 13
tae04148 Efferocytosis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 14
tae04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101263813 102599355 107822287 107798867 824651 100808578 103841389 100242749 7479860 7468434 25484929 121229720 107904278 106415228 102620292 4335201 100282554 123147670 123169381 123145878 123424488 8078604 100837006 5728766
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