Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121229720   vacuolar protein-sorting-associated protein 33 homolog 
 ath-u.5   ATVPS33   Sec1/munc18-like (SM) proteins superfamily 
 gma-u.5   100808578   vacuolar protein-sorting-associated protein 33 homolog 
 vvi-u.5   100242749   vacuolar protein-sorting-associated protein 33 homolog 
 ppo-u.5   7479860   vacuolar protein-sorting-associated protein 33 homolog 
 ppo-u.5   7468434   vacuolar protein-sorting-associated protein 33 homolog 
 mtr-u.5   25484929   vacuolar protein-sorting-associated protein 33 homolog 
 sly-u.5   101263813   vacuolar protein-sorting-associated protein 33 homolog 
 osa-u.5   4335201   vacuolar protein-sorting-associated protein 33 homolog 
 zma-u.5   100282554   uncharacterized LOC100282554 

close


Top 50 coexpressed genes to 121229720 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 121229720 (ghi-r.1 coexpression data)

CoexMap"121229720"


ghiLOC121229720 | Entrez gene ID : 121229720    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04148 [list] [network] Efferocytosis (152 genes)
GO BP
GO:0006886 [list] [network] intracellular protein transport  (804 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (1389 genes)  IEA  
GO CC
GO:0033263 [list] [network] CORVET complex  (2 genes)  IEA  
GO:0005773 [list] [network] vacuole  (578 genes)  IEA  
GO MF
Protein XP_040970558.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  golg 3,  vacu 1,  E.R. 1,  golg_plas 1,  E.R._vacu 1  (predict for XP_040970558.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040970558.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121229720
ath-u.5
for
ATVPS33
gma-u.5
for
100808578
vvi-u.5
for
100242749
ppo-u.5
for
7479860
ppo-u.5
for
7468434
mtr-u.5
for
25484929
sly-u.5
for
101263813
osa-u.5
for
4335201
zma-u.5
for
100282554


Ortholog ID: 9540
Species ghi ghi ath bra bna cit gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107904278 LOC121229720 ATVPS33 LOC103841389 LOC106415228 LOC102620292 LOC100808578 LOC100242749 LOC7479860 LOC7468434 LOC25484929 LOC101263813 LOC102599355 LOC107798867 LOC107822287 LOC4335201 LOC100282554 LOC123169381 LOC123145878 LOC123424488 LOC8078604 LOC100837006 CHLRE_12g515550v5
Function* vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog Sec1/munc18-like (SM) proteins superfamily vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog uncharacterized LOC100282554 vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
ghi04148 Efferocytosis 2
ghi00062 Fatty acid elongation 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
ghi04148 Efferocytosis 2
ghi00062 Fatty acid elongation 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 4
ath04148 Efferocytosis 3
ath00190 Oxidative phosphorylation 2
ath04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 9
bra04145 Phagosome 9
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
gma00010 Glycolysis / Gluconeogenesis 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
ppo00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
mtr04120 Ubiquitin mediated proteolysis 3
mtr03013 Nucleocytoplasmic transport 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta04144 Endocytosis 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 14
tae04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107904278 121229720 824651 103841389 106415228 102620292 100808578 100242749 7479860 7468434 25484929 101263813 102599355 107798867 107822287 4335201 100282554 123169381 123145878 123424488 8078604 100837006 5728766
The preparation time of this page was 0.1 [sec].