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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8078604   vacuolar protein-sorting-associated protein 33 homolog 
 zma-u.5   100282554   uncharacterized LOC100282554 
 osa-u.5   4335201   vacuolar protein-sorting-associated protein 33 homolog 
 ath-u.5   ATVPS33   Sec1/munc18-like (SM) proteins superfamily 
 gma-u.5   100808578   vacuolar protein-sorting-associated protein 33 homolog 
 sly-u.5   101263813   vacuolar protein-sorting-associated protein 33 homolog 
 vvi-u.5   100242749   vacuolar protein-sorting-associated protein 33 homolog 
 ppo-u.5   7479860   vacuolar protein-sorting-associated protein 33 homolog 
 ppo-u.5   7468434   vacuolar protein-sorting-associated protein 33 homolog 
 mtr-u.5   25484929   vacuolar protein-sorting-associated protein 33 homolog 

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Top 50 coexpressed genes to 8078604 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8078604 (sbi-r.1 coexpression data)

CoexMap"8078604"


sbiLOC8078604 | Entrez gene ID : 8078604      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04148 [list] [network] Efferocytosis (53 genes)
GO BP
GO:0006886 [list] [network] intracellular protein transport  (256 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (412 genes)  IEA  
GO CC
GO:0033263 [list] [network] CORVET complex  (1 genes)  IEA  
GO:0005773 [list] [network] vacuole  (210 genes)  IEA  
GO MF
Protein XP_002458010.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  vacu 1,  golg 1,  chlo 1,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_002458010.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002458010.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8078604

.
zma-u.5
for
100282554

.
osa-u.5
for
4335201

.
ath-u.5
for
ATVPS33

.
gma-u.5
for
100808578

.
sly-u.5
for
101263813

.
vvi-u.5
for
100242749

.
ppo-u.5
for
7479860

.
ppo-u.5
for
7468434

.
mtr-u.5
for
25484929

.


Ortholog ID: 9540
Species ath gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol ATVPS33 LOC100808578 LOC101263813 LOC4335201 LOC100282554 LOC103841389 LOC100242749 LOC7479860 LOC7468434 LOC25484929 LOC123169381 LOC123145878 LOC123424488 LOC107904278 LOC121229720 LOC106415228 CHLRE_12g515550v5 LOC8078604 LOC102599355 LOC102620292 LOC100837006 LOC107798867 LOC107822287
Function* Sec1/munc18-like (SM) proteins superfamily vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog uncharacterized LOC100282554 vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog uncharacterized protein vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog vacuolar protein-sorting-associated protein 33 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 4
ath04148 Efferocytosis 3
ath00190 Oxidative phosphorylation 2
ath04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
gma00010 Glycolysis / Gluconeogenesis 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 9
bra04145 Phagosome 9
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
ppo00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
mtr04120 Ubiquitin mediated proteolysis 3
mtr03013 Nucleocytoplasmic transport 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 14
tae04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
ghi04148 Efferocytosis 2
ghi00062 Fatty acid elongation 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
ghi04148 Efferocytosis 2
ghi00062 Fatty acid elongation 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta04144 Endocytosis 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824651 100808578 101263813 4335201 100282554 103841389 100242749 7479860 7468434 25484929 123169381 123145878 123424488 107904278 121229720 106415228 5728766 8078604 102599355 102620292 100837006 107798867 107822287
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