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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102584402   pentatricopeptide repeat-containing protein At4g39530 
 sly-u.5   101262649   pentatricopeptide repeat-containing protein At4g39530 
 nta-r.1   107777607   pentatricopeptide repeat-containing protein At4g39530-like 
 nta-r.1   107778722   pentatricopeptide repeat-containing protein At4g39530-like 
 ath-u.5   AT4G39530   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100798248   pentatricopeptide repeat-containing protein At4g39530 
 bra-r.6   103828034   pentatricopeptide repeat-containing protein At4g39530 
 vvi-u.5   100257737   pentatricopeptide repeat-containing protein At4g39530 
 ghi-r.1   107931183   pentatricopeptide repeat-containing protein At4g39530 
 cit-r.1   102623821   pentatricopeptide repeat-containing protein At4g39530 
 osa-u.5   4345325   pentatricopeptide repeat-containing protein At4g39530 
 zma-u.5   103651633   pentatricopeptide repeat-containing protein At4g39530 
 hvu-r.1   123445694   pentatricopeptide repeat-containing protein At4g39530 
 bdi-r.1   100840212   pentatricopeptide repeat-containing protein At4g39530 

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Top 50 coexpressed genes to 102584402 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102584402 (sot-r.1 coexpression data)

CoexMap"102584402"


sotLOC102584402 | Entrez gene ID : 102584402      
Species sot sly nta ath gma bra vvi ghi cit osa zma hvu bdi tae bna ppo cre mtr sbi
Paralog 1 1 2 1 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006348570.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  plas 2,  mito 1,  nucl_plas 1,  cyto_plas 1  (predict for XP_006348570.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_006348570.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102584402
sly-u.5
for
101262649
nta-r.1
for
107777607
nta-r.1
for
107778722
ath-u.5
for
AT4G39530
gma-u.5
for
100798248
bra-r.6
for
103828034
vvi-u.5
for
100257737
ghi-r.1
for
107931183
cit-r.1
for
102623821
osa-u.5
for
4345325
zma-u.5
for
103651633
hvu-r.1
for
123445694
bdi-r.1
for
100840212


Ortholog ID: 12224
Species sot sly nta nta ath gma bra vvi ghi cit osa zma hvu bdi
Symbol LOC102584402 LOC101262649 LOC107777607 LOC107778722 AT4G39530 LOC100798248 LOC103828034 LOC100257737 LOC107931183 LOC102623821 LOC4345325 LOC103651633 LOC123445694 LOC100840212
Function* pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530-like pentatricopeptide repeat-containing protein At4g39530-like Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102584402 101262649 107777607 107778722 830107 100798248 103828034 100257737 107931183 102623821 4345325 103651633 123445694 100840212
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