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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1  107777607  pentatricopeptide repeat-containing protein At4g39530-like 
 sly-u.5  101262649  pentatricopeptide repeat-containing protein At4g39530 
 ath-u.5  AT4G39530  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100798248  pentatricopeptide repeat-containing protein At4g39530 
 vvi-u.5  100257737  pentatricopeptide repeat-containing protein At4g39530 
 osa-u.5  4345325  pentatricopeptide repeat-containing protein At4g39530 
 zma-u.5  103651633  pentatricopeptide repeat-containing protein At4g39530 

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Top 50 coexpressed genes to 107777607 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107777607 (nta-r.1 coexpression data)

CoexMap"107777607"


ntaLOC107777607 | Entrez gene ID : 107777607
Species nta sly ath gma vvi osa zma bdi mtr bra hvu cit bna ppo sbi ghi sot cre tae
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016453146.2 [sequence] [blastp]
XP_016453147.2 [sequence] [blastp]
XP_075100908.1 [sequence] [blastp]
XP_075100909.1 [sequence] [blastp]
XP_075100910.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 1,  nucl 1,  plas 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_016453146.2)
chlo 4,  mito 1,  nucl 1,  plas 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_016453147.2)
chlo 4,  mito 1,  nucl 1,  plas 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_075100908.1)
chlo 6,  mito 2,  cyto_mito 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_075100909.1)
chlo 6,  mito 2,  cyto_mito 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_075100910.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_016453146.2)
mito 5  (predict for XP_016453147.2)
mito 5  (predict for XP_075100908.1)
mito 5  (predict for XP_075100909.1)
mito 5  (predict for XP_075100910.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

nta-r.1
for
107777607


sly-u.5
for
101262649


ath-u.5
for
AT4G39530


gma-u.5
for
100798248


vvi-u.5
for
100257737


osa-u.5
for
4345325


zma-u.5
for
103651633



Ortholog ID: 12224
Species nta nta sly sot ath gma bra vvi ghi cit osa zma hvu bdi
Symbol LOC107777607 LOC107778722 LOC101262649 LOC102584402 AT4G39530 LOC100798248 LOC103828034 LOC100257737 LOC107931183 LOC102623821 LOC4345325 LOC103651633 LOC123445694 LOC100840212
Function* pentatricopeptide repeat-containing protein At4g39530-like pentatricopeptide repeat-containing protein At4g39530-like pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107777607 107778722 101262649 102584402 830107 100798248 103828034 100257737 107931183 102623821 4345325 103651633 123445694 100840212
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