Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4345325   pentatricopeptide repeat-containing protein At4g39530 
 osa-r.6   4345325   pentatricopeptide repeat-containing protein At4g39530 
 osa-m.8   4345325   pentatricopeptide repeat-containing protein At4g39530 
 osa-e.1   4345325   pentatricopeptide repeat-containing protein At4g39530 
 zma-u.5   103651633   pentatricopeptide repeat-containing protein At4g39530 
 ath-u.5   AT4G39530   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100798248   pentatricopeptide repeat-containing protein At4g39530 
 sly-u.5   101262649   pentatricopeptide repeat-containing protein At4g39530 
 vvi-u.5   100257737   pentatricopeptide repeat-containing protein At4g39530 

close


Top 50 coexpressed genes to 4345325 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 4345325 (osa-u.5 coexpression data)

CoexMap"4345325"


osaLOC4345325 | Entrez gene ID : 4345325      
Species osa zma ath gma sly vvi hvu bna cit bra ghi mtr ppo sbi bdi nta tae cre sot
Paralog 4 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (252 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5729 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015648262.1 [sequence] [blastp]
XP_025875722.1 [sequence] [blastp]
XP_025875725.1 [sequence] [blastp]
XP_025875726.1 [sequence] [blastp]
XP_025875727.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_015648262.1)
chlo 8,  mito 1  (predict for XP_025875722.1)
chlo 8,  mito 1  (predict for XP_025875725.1)
chlo 8,  mito 1  (predict for XP_025875726.1)
chlo 8,  mito 1  (predict for XP_025875727.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_015648262.1)
mito 7  (predict for XP_025875722.1)
mito 7  (predict for XP_025875725.1)
mito 7  (predict for XP_025875726.1)
mito 7  (predict for XP_025875727.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4345325
osa-r.6
for
4345325
osa-m.8
for
4345325
osa-e.1
for
4345325
zma-u.5
for
103651633
ath-u.5
for
AT4G39530
gma-u.5
for
100798248
sly-u.5
for
101262649
vvi-u.5
for
100257737


Ortholog ID: 12224
Species osa hvu bdi zma ath gma sly bra vvi ghi sot cit nta nta
Symbol LOC4345325 LOC123445694 LOC100840212 LOC103651633 AT4G39530 LOC100798248 LOC101262649 LOC103828034 LOC100257737 LOC107931183 LOC102584402 LOC102623821 LOC107777607 LOC107778722
Function* pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein At4g39530-like pentatricopeptide repeat-containing protein At4g39530-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4345325 123445694 100840212 103651633 830107 100798248 101262649 103828034 100257737 107931183 102584402 102623821 107777607 107778722
The preparation time of this page was 0.1 [sec].