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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102588120   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 sly-u.5   101264728   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 nta-r.1   107777054   uncharacterized LOC107777054 
 nta-r.1   107830101   uncharacterized LOC107830101 
 ath-u.5   AT1G13040   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100801230   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 bra-r.6   103836128   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 bra-r.6   103871963   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 ppo-u.5   7469038   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 mtr-u.5   25501832   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 ghi-r.1   107898650   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 ghi-r.1   107933408   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 bna-r.1   106401971   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 bna-r.1   106382358   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 cit-r.1   102621409   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 osa-u.5   4344353   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 zma-u.5   103633582   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 tae-r.2   123043612   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 tae-r.2   123187414   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 tae-r.2   123051483   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 hvu-r.1   123424658   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 sbi-r.1   8074474   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 bdi-r.1   100820876   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 

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Top 50 coexpressed genes to 102588120 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102588120 (sot-r.1 coexpression data)

CoexMap"102588120"


sotLOC102588120 | Entrez gene ID : 102588120    
Species sot sly nta ath gma bra ppo mtr ghi bna cit osa zma tae hvu sbi bdi vvi cre
Paralog 1 1 2 1 1 2 1 1 2 2 1 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (10 genes)  IEA  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (11 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (606 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_015159480.1 [sequence] [blastp]
XP_015159481.1 [sequence] [blastp]
XP_015159482.1 [sequence] [blastp]
XP_015159483.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_015159480.1)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_015159481.1)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_015159482.1)
chlo 6,  chlo_mito 4,  mito 3,  cyto_mito 1  (predict for XP_015159483.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_015159480.1)
mito 9  (predict for XP_015159481.1)
mito 9  (predict for XP_015159482.1)
mito 9  (predict for XP_015159483.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102588120
sly-u.5
for
101264728
nta-r.1
for
107777054
nta-r.1
for
107830101
ath-u.5
for
AT1G13040
gma-u.5
for
100801230
bra-r.6
for
103836128
bra-r.6
for
103871963
ppo-u.5
for
7469038
mtr-u.5
for
25501832
ghi-r.1
for
107898650
ghi-r.1
for
107933408
bna-r.1
for
106401971
bna-r.1
for
106382358
cit-r.1
for
102621409
osa-u.5
for
4344353
zma-u.5
for
103633582
tae-r.2
for
123043612
tae-r.2
for
123187414
tae-r.2
for
123051483
hvu-r.1
for
123424658
sbi-r.1
for
8074474
bdi-r.1
for
100820876


Ortholog ID: 10452
Species sot sly nta nta ath gma bra bra ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC102588120 LOC101264728 LOC107777054 LOC107830101 AT1G13040 LOC100801230 LOC103836128 LOC103871963 LOC7469038 LOC25501832 LOC107898650 LOC107933408 LOC106401971 LOC106382358 LOC102621409 LOC4344353 LOC103633582 LOC123043612 LOC123187414 LOC123051483 LOC123424658 LOC8074474 LOC100820876
Function* pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial uncharacterized LOC107777054 uncharacterized LOC107830101 Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 3
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 3
hvu00010 Glycolysis / Gluconeogenesis 2
hvu03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102588120 101264728 107777054 107830101 837861 100801230 103836128 103871963 7469038 25501832 107898650 107933408 106401971 106382358 102621409 4344353 103633582 123043612 123187414 123051483 123424658 8074474 100820876
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