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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123424658   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 osa-u.5   4344353   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 zma-u.5   103633582   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 ath-u.5   AT1G13040   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100801230   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 sly-u.5   101264728   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 ppo-u.5   7469038   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 mtr-u.5   25501832   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 

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Top 50 coexpressed genes to 123424658 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123424658 (hvu-r.1 coexpression data)

CoexMap"123424658"


hvuLOC123424658 | Entrez gene ID : 123424658    
Species hvu osa zma ath gma sly ppo mtr bdi bra vvi cit bna sbi ghi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044964245.1 [sequence] [blastp]
XP_044964246.1 [sequence] [blastp]
XP_044964247.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  mito 1,  vacu 1,  cyto 1,  plas 1,  extr 1,  E.R._vacu 1,  cyto_plas 1  (predict for XP_044964245.1)
chlo 4,  chlo_mito 4,  mito 1,  vacu 1,  cyto 1,  plas 1,  extr 1,  E.R._vacu 1,  cyto_plas 1  (predict for XP_044964246.1)
chlo 4,  chlo_mito 3,  vacu 1,  mito 1,  nucl 1,  cyto 1,  plas 1,  extr 1,  cyto_nucl 1,  nucl_plas 1,  E.R._vacu 1,  cyto_plas 1  (predict for XP_044964247.1)
Subcellular
localization
TargetP
mito 7,  chlo 4  (predict for XP_044964245.1)
mito 7,  chlo 4  (predict for XP_044964246.1)
mito 7,  chlo 4  (predict for XP_044964247.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123424658
osa-u.5
for
4344353
zma-u.5
for
103633582
ath-u.5
for
AT1G13040
gma-u.5
for
100801230
sly-u.5
for
101264728
ppo-u.5
for
7469038
mtr-u.5
for
25501832


Ortholog ID: 10452
Species hvu tae tae bdi osa zma sbi ath gma sly bra bra ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123424658 LOC123043612 LOC123187414 LOC100820876 LOC4344353 LOC103633582 LOC8074474 AT1G13040 LOC100801230 LOC101264728 LOC103871963 LOC103836128 LOC7469038 LOC25501832 LOC107898650 LOC107933408 LOC106382358 LOC106401971 LOC102588120 LOC102621409 LOC107777054 LOC107830101
Function* pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial uncharacterized LOC107777054 uncharacterized LOC107830101
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 3
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 3
hvu00010 Glycolysis / Gluconeogenesis 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123424658 123043612 123187414 100820876 4344353 103633582 8074474 837861 100801230 101264728 103871963 103836128 7469038 25501832 107898650 107933408 106382358 106401971 102588120 102621409 107777054 107830101
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