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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25501832   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 mtr-r.5   25501832   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 gma-u.5   100801230   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 ppo-u.5   7469038   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 ath-u.5   AT1G13040   Pentatricopeptide repeat (PPR-like) superfamily protein 
 sly-u.5   101264728   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 osa-u.5   4344353   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 
 zma-u.5   103633582   pentatricopeptide repeat-containing protein At1g13040, mitochondrial 

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Top 50 coexpressed genes to 25501832 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25501832 (mtr-u.5 coexpression data)

CoexMap"25501832"


mtrLOC25501832 | Entrez gene ID : 25501832    
Species mtr gma ppo ath sly osa zma sbi nta bra cre vvi cit hvu bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (294 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_013446721.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 4  (predict for XP_013446721.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_013446721.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25501832

.
mtr-r.5
for
25501832

.
gma-u.5
for
100801230

.
ppo-u.5
for
7469038

.
ath-u.5
for
AT1G13040

.
sly-u.5
for
101264728

.
osa-u.5
for
4344353

.
zma-u.5
for
103633582

.


Ortholog ID: 10452
Species ath gma sly osa zma bra bra ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G13040 LOC100801230 LOC101264728 LOC4344353 LOC103633582 LOC103871963 LOC103836128 LOC7469038 LOC25501832 LOC123043612 LOC123187414 LOC123424658 LOC107898650 LOC107933408 LOC106382358 LOC106401971 LOC8074474 LOC102588120 LOC102621409 LOC100820876 LOC107777054 LOC107830101
Function* Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial pentatricopeptide repeat-containing protein At1g13040, mitochondrial uncharacterized LOC107777054 uncharacterized LOC107830101
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 3
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 3
hvu00010 Glycolysis / Gluconeogenesis 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837861 100801230 101264728 4344353 103633582 103871963 103836128 7469038 25501832 123043612 123187414 123424658 107898650 107933408 106382358 106401971 8074474 102588120 102621409 100820876 107777054 107830101
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