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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1  102593320  myb-related protein A 
 sot-r.1  102589190  transcription factor RAX2-like 
 sly-u.5  101260045  transcription factor MYB124 
 nta-r.1  107792411  transcription factor MYB124 
 nta-r.1  107793683  transcription factor MYB124-like 
 ath-u.5  MYB88  myb domain protein 88 
 ath-u.5  FLP  Duplicated homeodomain-like superfamily protein 
 gma-u.5  100807667  transcription factor MYB88 
 gma-u.5  100803030  transcription factor MYB88 
 bra-r.6  103853976  transcription factor MYB88 
 bra-r.6  103827503  transcription factor MYB88 
 bra-r.6  103872133  transcription factor MYB124 
 vvi-u.5  100246639  transcription factor MYB124 
 ppo-u.5  7471495  transcription factor MYB88 
 ppo-u.5  7459044  transcription factor MYB124 
 mtr-u.5  25502747  transcription factor MYB124 
 mtr-u.5  11427731  transcription factor MYB88 
 ghi-r.1  107948812  transcription factor MYB124 
 ghi-r.1  107920074  transcription factor MYB88 
 ghi-r.1  107893962  transcription factor MYB124 
 bna-r.1  125596217  transcription factor MYB88-like 
 bna-r.1  106438192  transcription factor MYB88 
 cit-r.1  102629689  transcription factor MYB124 
 osa-u.5  4343977  transcription factor MYB124 
 zma-u.5  100381853  uncharacterized LOC100381853 
 tae-r.2  123044121  transcription factor MYB88 
 tae-r.2  123052002  transcription factor MYB88 
 tae-r.2  123187866  transcription factor MYB88 
 hvu-r.1  123425207  uncharacterized LOC123425207 
 sbi-r.1  8063503  transcription factor MYB124 
 bdi-r.1  100835080  transcription factor MYB124 
 cre-r.1  CHLRE_02g103450v5  uncharacterized protein 

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Top 50 coexpressed genes to 102593320 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102593320 (sot-r.1 coexpression data)

CoexMap"102593320"


sotLOC102593320 | Entrez gene ID : 102593320
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 2 2 3 1 2 2 3 2 1 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1516 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2556 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (177 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (226 genes)  IEA  
Protein XP_006363244.1 [sequence] [blastp]
XP_006363245.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_006363244.1)
nucl 8,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_006363245.1)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for XP_006363244.1)
chlo 5,  other 3  (predict for XP_006363245.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sot-r.1
for
102593320


sot-r.1
for
102589190


sly-u.5
for
101260045


nta-r.1
for
107792411


nta-r.1
for
107793683


ath-u.5
for
MYB88


ath-u.5
for
FLP


gma-u.5
for
100807667


gma-u.5
for
100803030


bra-r.6
for
103853976


bra-r.6
for
103827503


bra-r.6
for
103872133


vvi-u.5
for
100246639


ppo-u.5
for
7471495


ppo-u.5
for
7459044


mtr-u.5
for
25502747


mtr-u.5
for
11427731


ghi-r.1
for
107948812


ghi-r.1
for
107920074


ghi-r.1
for
107893962


bna-r.1
for
125596217


bna-r.1
for
106438192


cit-r.1
for
102629689


osa-u.5
for
4343977


zma-u.5
for
100381853


tae-r.2
for
123044121


tae-r.2
for
123052002


tae-r.2
for
123187866


hvu-r.1
for
123425207


sbi-r.1
for
8063503


bdi-r.1
for
100835080


cre-r.1
for
CHLRE_02g103450v5



Ortholog ID: 4333
Species sot sot sly nta nta ath ath gma bra bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102593320 LOC102589190 LOC101260045 LOC107792411 LOC107793683 MYB88 FLP LOC100803030 LOC103853976 LOC103827503 LOC103872133 LOC100246639 LOC7471495 LOC7459044 LOC25502747 LOC11427731 LOC107948812 LOC107893962 LOC107887116 LOC125596217 LOC106438192 LOC106369333 LOC102629689 LOC4343977 LOC100381853 LOC123044121 LOC123052002 LOC123187866 LOC123425207 LOC8063503 LOC100835080 CHLRE_02g103450v5
Function* myb-related protein A transcription factor RAX2-like transcription factor MYB124 transcription factor MYB124 transcription factor MYB124-like myb domain protein 88 Duplicated homeodomain-like superfamily protein transcription factor MYB88 transcription factor MYB88 transcription factor MYB88 transcription factor MYB124 transcription factor MYB124 transcription factor MYB88 transcription factor MYB124 transcription factor MYB124 transcription factor MYB88 transcription factor MYB124 transcription factor MYB124 transcription factor MYB124 transcription factor MYB88-like transcription factor MYB88 transcription factor MYB88 transcription factor MYB124 transcription factor MYB124 uncharacterized LOC100381853 transcription factor MYB88 transcription factor MYB88 transcription factor MYB88 uncharacterized LOC123425207 transcription factor MYB124 transcription factor MYB124 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 5
osa03460 Fanconi anemia pathway 3
osa03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 4
sbi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102593320 102589190 101260045 107792411 107793683 814812 837997 100803030 103853976 103827503 103872133 100246639 7471495 7459044 25502747 11427731 107948812 107893962 107887116 125596217 106438192 106369333 102629689 4343977 100381853 123044121 123052002 123187866 123425207 8063503 100835080 5725546
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