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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1  102593843  pentatricopeptide repeat-containing protein At5g08305 
 sly-u.5  101263897  pentatricopeptide repeat-containing protein At5g08305 
 ath-u.5  AT5G08305  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100801523  pentatricopeptide repeat-containing protein At5g08305 
 vvi-u.5  100263021  pentatricopeptide repeat-containing protein At5g08305 
 mtr-u.5  11424652  pentatricopeptide repeat-containing protein At5g08305 
 osa-u.5  4348732  pentatricopeptide repeat-containing protein At5g08305 
 zma-u.5  103631696  pentatricopeptide repeat-containing protein At5g08305 

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Top 50 coexpressed genes to 102593843 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102593843 (sot-r.1 coexpression data)

CoexMap"102593843"


sotLOC102593843 | Entrez gene ID : 102593843
Species sot sly ath gma vvi mtr osa zma bdi hvu bra cit bna ppo sbi ghi nta cre tae
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006359300.1 [sequence] [blastp]
XP_015169864.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_006359300.1)
cyto 8,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_015169864.1)
Subcellular
localization
TargetP
other 7  (predict for XP_006359300.1)
other 7  (predict for XP_015169864.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sot-r.1
for
102593843


sly-u.5
for
101263897


ath-u.5
for
AT5G08305


gma-u.5
for
100801523


vvi-u.5
for
100263021


mtr-u.5
for
11424652


osa-u.5
for
4348732


zma-u.5
for
103631696



Ortholog ID: 11547
Species sot sly nta ath gma bra vvi mtr ghi ghi cit osa zma hvu sbi
Symbol LOC102593843 LOC101263897 LOC107803632 AT5G08305 LOC100801523 LOC103855773 LOC100263021 LOC11424652 LOC121228229 LOC107898866 LOC102627679 LOC4348732 LOC103631696 LOC123429726 LOC8085510
Function* pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102593843 101263897 107803632 10723051 100801523 103855773 100263021 11424652 121228229 107898866 102627679 4348732 103631696 123429726 8085510
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