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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1  8085510  pentatricopeptide repeat-containing protein At5g08305 
 zma-u.5  103631696  pentatricopeptide repeat-containing protein At5g08305 
 osa-u.5  4348732  pentatricopeptide repeat-containing protein At5g08305 
 ath-u.5  AT5G08305  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100801523  pentatricopeptide repeat-containing protein At5g08305 
 sly-u.5  101263897  pentatricopeptide repeat-containing protein At5g08305 
 vvi-u.5  100263021  pentatricopeptide repeat-containing protein At5g08305 
 mtr-u.5  11424652  pentatricopeptide repeat-containing protein At5g08305 

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Top 50 coexpressed genes to 8085510 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8085510 (sbi-r.1 coexpression data)

CoexMap"8085510"


sbiLOC8085510 | Entrez gene ID : 8085510
Species sbi zma osa ath gma sly vvi mtr bra nta cre hvu cit bdi ppo sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002468537.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_002468537.2)
Subcellular
localization
TargetP
chlo 5,  other 4  (predict for XP_002468537.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sbi-r.1
for
8085510

.

zma-u.5
for
103631696

.

osa-u.5
for
4348732

.

ath-u.5
for
AT5G08305

.

gma-u.5
for
100801523

.

sly-u.5
for
101263897

.

vvi-u.5
for
100263021

.

mtr-u.5
for
11424652

.


Ortholog ID: 11547
Species ath gma sly osa zma bra vvi mtr hvu ghi ghi sbi sot cit nta
Symbol AT5G08305 LOC100801523 LOC101263897 LOC4348732 LOC103631696 LOC103855773 LOC100263021 LOC11424652 LOC123429726 LOC121228229 LOC107898866 LOC8085510 LOC102593843 LOC102627679 LOC107803632
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 10723051 100801523 101263897 4348732 103631696 103855773 100263021 11424652 123429726 121228229 107898866 8085510 102593843 102627679 107803632
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