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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121228229   pentatricopeptide repeat-containing protein At5g08305 
 ghi-r.1   107898866   pentatricopeptide repeat-containing protein At5g08305 
 ath-u.5   AT5G08305   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103855773   pentatricopeptide repeat-containing protein At5g08305 
 cit-r.1   102627679   pentatricopeptide repeat-containing protein At5g08305 
 gma-u.5   100801523   pentatricopeptide repeat-containing protein At5g08305 
 vvi-u.5   100263021   pentatricopeptide repeat-containing protein At5g08305 
 mtr-u.5   11424652   pentatricopeptide repeat-containing protein At5g08305 
 sly-u.5   101263897   pentatricopeptide repeat-containing protein At5g08305 
 sot-r.1   102593843   pentatricopeptide repeat-containing protein At5g08305 
 nta-r.1   107803632   pentatricopeptide repeat-containing protein At5g08305 
 osa-u.5   4348732   pentatricopeptide repeat-containing protein At5g08305 
 zma-u.5   103631696   pentatricopeptide repeat-containing protein At5g08305 
 hvu-r.1   123429726   pentatricopeptide repeat-containing protein At5g08305 
 sbi-r.1   8085510   pentatricopeptide repeat-containing protein At5g08305 

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Top 50 coexpressed genes to 121228229 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121228229 (ghi-r.1 coexpression data)

CoexMap"121228229"


ghiLOC121228229 | Entrez gene ID : 121228229    
Species ghi ath bra cit gma vvi mtr sly sot nta osa zma hvu sbi bdi tae bna ppo cre
Paralog 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040967485.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  E.R. 2,  chlo 1,  nucl 1,  E.R._vacu 1  (predict for XP_040967485.1)
Subcellular
localization
TargetP
other 7  (predict for XP_040967485.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121228229
ghi-r.1
for
107898866
ath-u.5
for
AT5G08305
bra-r.6
for
103855773
cit-r.1
for
102627679
gma-u.5
for
100801523
vvi-u.5
for
100263021
mtr-u.5
for
11424652
sly-u.5
for
101263897
sot-r.1
for
102593843
nta-r.1
for
107803632
osa-u.5
for
4348732
zma-u.5
for
103631696
hvu-r.1
for
123429726
sbi-r.1
for
8085510


Ortholog ID: 11547
Species ghi ghi ath bra cit gma vvi mtr sly sot nta osa zma hvu sbi
Symbol LOC121228229 LOC107898866 AT5G08305 LOC103855773 LOC102627679 LOC100801523 LOC100263021 LOC11424652 LOC101263897 LOC102593843 LOC107803632 LOC4348732 LOC103631696 LOC123429726 LOC8085510
Function* pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305 pentatricopeptide repeat-containing protein At5g08305
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121228229 107898866 10723051 103855773 102627679 100801523 100263021 11424652 101263897 102593843 107803632 4348732 103631696 123429726 8085510
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