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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102594042   crooked neck-like protein 1 
 sly-u.5   101245441   uncharacterized LOC101245441 
 sly-u.5   101257538   uncharacterized LOC101257538 
 ath-u.5   AT5G41770   crooked neck protein, putative / cell cycle protein 
 gma-u.5   100811745   crooked neck-like protein 1 
 gma-u.5   100791616   crooked neck-like protein 1 
 vvi-u.5   100255371   crooked neck-like protein 1 
 ppo-u.5   7458229   uncharacterized LOC7458229 
 ppo-u.5   7479272   uncharacterized LOC7479272 
 mtr-u.5   11426099   crooked neck-like protein 1 
 mtr-u.5   11439028   crooked neck-like protein 1 
 osa-u.5   4338298   uncharacterized LOC4338298 
 zma-u.5   103643760   crooked neck-like protein 1 

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Top 50 coexpressed genes to 102594042 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102594042 (sot-r.1 coexpression data)

CoexMap"102594042"


sotLOC102594042 | Entrez gene ID : 102594042    
Species sot sly ath gma vvi ppo mtr osa zma hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 1 2 1 2 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03040 [list] [network] Spliceosome (223 genes)
GO BP
GO:0000245 [list] [network] spliceosomal complex assembly  (21 genes)  IEA  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (151 genes)  IEA  
GO CC
GO:0071007 [list] [network] U2-type catalytic step 2 spliceosome  (8 genes)  IEA  
GO:0071014 [list] [network] post-mRNA release spliceosomal complex  (14 genes)  IEA  
GO:0000974 [list] [network] Prp19 complex  (18 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (28 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006339106.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  cyto_mito 3,  chlo 3,  cyto 1  (predict for XP_006339106.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_006339106.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102594042

.
sly-u.5
for
101245441

.
sly-u.5
for
101257538

.
ath-u.5
for
AT5G41770

.
gma-u.5
for
100811745

.
gma-u.5
for
100791616

.
vvi-u.5
for
100255371

.
ppo-u.5
for
7458229

.
ppo-u.5
for
7479272

.
mtr-u.5
for
11426099

.
mtr-u.5
for
11439028

.
osa-u.5
for
4338298

.
zma-u.5
for
103643760

.


Ortholog ID: 5736
Species gma gma sly sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi nta nta
Symbol LOC100791616 LOC100811745 LOC101245441 LOC101257538 LOC4338298 LOC103643760 LOC103864120 LOC103850228 LOC100255371 LOC7458229 LOC7479272 LOC11426099 LOC11439028 LOC123155830 LOC123163807 LOC123413606 LOC107924173 LOC107904473 LOC125576576 LOC106406050 CHLRE_14g621000v5 LOC8054178 LOC8076963 LOC102604573 LOC102594042 LOC102620269 LOC100829074 LOC107781942 LOC107790486
Function* crooked neck-like protein 1 crooked neck-like protein 1 uncharacterized LOC101245441 uncharacterized LOC101257538 uncharacterized LOC4338298 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 uncharacterized LOC7458229 uncharacterized LOC7479272 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 uncharacterized protein crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 uncharacterized LOC102620269 crooked neck-like protein 1 uncharacterized LOC107781942 uncharacterized LOC107790486
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 10
gma03015 mRNA surveillance pathway 5
gma03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma00970 Aminoacyl-tRNA biosynthesis 4
gma03015 mRNA surveillance pathway 3
gma03022 Basal transcription factors 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 4
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03082 ATP-dependent chromatin remodeling 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
bdi04120 Ubiquitin mediated proteolysis 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03040 Spliceosome 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100791616 100811745 101245441 101257538 4338298 103643760 103864120 103850228 100255371 7458229 7479272 11426099 11439028 123155830 123163807 123413606 107924173 107904473 125576576 106406050 5715897 8054178 8076963 102604573 102594042 102620269 100829074 107781942 107790486
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